RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 TRAF7Q6Q0C0 670 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 FOXD4L3Q6VB84 417 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-215ENST00000457039 LINC01465Q8N7H1 131 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 AK8Q96MA6 479 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 DAXXQ9UER7 740 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-215ENST00000457039 SRPRBQ9Y5M8 271 aaKnown RBP15.82■□□□□ 0.12
SMPD4-215ENST00000457039 KAT6AQ92794 2004 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 DDX11L8A8MPP1 907 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 CKBP12277 381 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 CYP2C18P33260 490 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 LONP1P36776 959 aaKnown RBP15.81■□□□□ 0.12
SMPD4-215ENST00000457039 NPEPPSP55786 919 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 MTERF2Q49AM1 385 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 PLA2G4FQ68DD2 849 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 MFSD5Q6N075 450 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 POTEGQ6S5H5 508 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
SMPD4-215ENST00000457039 SNX29Q8TEQ0 813 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 SH2D3AQ9BRG2 576 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 PPP1R12CQ9BZL4 782 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 PPME1Q9Y570 386 aa15.81■□□□□ 0.12
SMPD4-215ENST00000457039 IGKV6-21A0A0C4DH24 114 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 SMIM35A0A1B0GVV1 85 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 SPTLC2O15270 562 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 MAGEB2O15479 319 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 CAND2O75155 1236 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 PPP6R2O75170 966 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 XRCC6P12956 609 aaKnown RBP eCLIP15.8■□□□□ 0.12
SMPD4-215ENST00000457039 CCT6AP40227 531 aaKnown RBP15.8■□□□□ 0.12
SMPD4-215ENST00000457039 STK38Q15208 465 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 HYIQ5T013 277 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 KRT79Q5XKE5 535 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 CCDC155Q8N6L0 562 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 BADQ92934 168 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 CHAMP1Q96JM3 812 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 CSRNP2Q9H175 543 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 CYP26B1Q9NR63 512 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 ANKEF1Q9NU02 776 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 CIZ1Q9ULV3 898 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-215ENST00000457039 TANC1Q9C0D5 1861 aa15.8■□□□□ 0.12
SMPD4-215ENST00000457039 A0A087WWV3 80 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 MAFO75444 373 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-215ENST00000457039 IQCF3P0C7M6 154 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 SELPP16109 830 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 THPOP40225 353 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 MAGEA10P43363 369 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-215ENST00000457039 RARRES1P49788 294 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 CCL23P55773 120 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 GPNMBQ14956 572 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 ZNF618Q5T7W0 954 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 OTUD6AQ7L8S5 288 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 KIAA0319LQ8IZA0 1049 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 KRI1Q8N9T8 703 aaKnown RBP15.79■□□□□ 0.12
SMPD4-215ENST00000457039 PIGOQ8TEQ8 1089 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 DNAJB3Q8WWF6 145 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 VWCEQ96DN2 955 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 CEP170P1Q96L14 293 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 CLIC6Q96NY7 704 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 PNMA5Q96PV4 448 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 NACC1Q96RE7 527 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 GDF15Q99988 308 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 DHX33Q9H6R0 707 aaKnown RBP15.79■□□□□ 0.12
SMPD4-215ENST00000457039 DBR1Q9UK59 544 aaKnown RBP15.79■□□□□ 0.12
SMPD4-215ENST00000457039 RCOR1Q9UKL0 485 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 CFAP45Q9UL16 551 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 ATP6V1DQ9Y5K8 247 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 CEP290O15078 2479 aa15.79■□□□□ 0.12
SMPD4-215ENST00000457039 ARID2Q68CP9 1835 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 SLC26A4O43511 780 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 RPLP2P05387 115 aaKnown RBP15.78■□□□□ 0.12
SMPD4-215ENST00000457039 MDM2Q00987 491 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-215ENST00000457039 MGAT3Q09327 533 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 TBC1D8BQ0IIM8 1120 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 GRB10Q13322 594 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-215ENST00000457039 MBTPS1Q14703 1052 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 XKR9Q5GH70 373 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 FAM26DQ5JW98 314 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 USP49Q70CQ1 688 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 LRRC8DQ7L1W4 858 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 CABP7Q86V35 215 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 RETREG2Q8NC44 543 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 SCLYQ96I15 445 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 CCSER1Q9C0I3 900 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 FAM49AQ9H0Q0 323 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-215ENST00000457039 DDX19AQ9NUU7 478 aaKnown RBP15.78■□□□□ 0.12
SMPD4-215ENST00000457039 KIAA1024Q9UPX6 916 aa15.78■□□□□ 0.12
SMPD4-215ENST00000457039 KDM3AQ9Y4C1 1321 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 RFC5P40937 340 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 CLCN3P51790 818 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 KRT85P78386 507 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 TMEM119Q4V9L6 283 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 AXDND1Q5T1B0 1012 aaPredicted RBP15.77■□□□□ 0.12
SMPD4-215ENST00000457039 PRPF38BQ5VTL8 546 aaKnown RBP15.77■□□□□ 0.12
SMPD4-215ENST00000457039 EFCAB12Q6NXP0 572 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 KCNK18Q7Z418 384 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 NME8Q8N427 588 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 LRRC71Q8N4P6 559 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 TMEM199Q8N511 208 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms