RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 NLRP5P59047 1200 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 PAK2Q13177 524 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 NTRK3Q16288 839 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 LEXMQ3ZCV2 418 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 TIGD5Q53EQ6 642 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 PTCRAQ6ISU1 281 aaPredicted RBP14.66□□□□□ -0.06
TREX1-203ENST00000456089 PDXDC2PQ6P474 469 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 NIPA1Q7RTP0 329 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 ZNF689Q96CS4 500 aaPredicted RBP14.66□□□□□ -0.06
TREX1-203ENST00000456089 ZNF577Q9BSK1 485 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 ZMYND12Q9H0C1 365 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 ALG13Q9NP73 1137 aaKnown RBP14.66□□□□□ -0.06
TREX1-203ENST00000456089 ZNF302Q9NR11 478 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 VPS54Q9P1Q0 977 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 MRPL42Q9Y6G3 142 aaKnown RBP14.66□□□□□ -0.06
TREX1-203ENST00000456089 IGSF9BQ9UPX0 1349 aa14.66□□□□□ -0.06
TREX1-203ENST00000456089 SMIM35A0A1B0GVV1 85 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 FAM86C2PA6NEL3 165 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 MGEA5O60502 916 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 DEXIO95424 95 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 CYP3A4P08684 503 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 GTF2F1P35269 517 aaKnown RBP eCLIP14.65□□□□□ -0.06
TREX1-203ENST00000456089 KRT76Q01546 638 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 NFX1Q12986 1120 aaKnown RBP14.65□□□□□ -0.06
TREX1-203ENST00000456089 CLUL1Q15846 466 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 PRR16Q569H4 304 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 FAM160B1Q5W0V3 765 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 CKAP2LQ8IYA6 745 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 ATP8B4Q8TF62 1192 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 TMEM40Q8WWA1 233 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 GJA10Q969M2 543 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 NSUN3Q9H649 340 aaKnown RBP14.65□□□□□ -0.06
TREX1-203ENST00000456089 SH3GLB2Q9NR46 395 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 CLDND1Q9NY35 253 aa14.65□□□□□ -0.06
TREX1-203ENST00000456089 NOC2LQ9Y3T9 749 aaKnown RBP14.65□□□□□ -0.06
TREX1-203ENST00000456089 EDIL3O43854 480 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 HBP1O60381 514 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 DTNBO60941 627 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 XBP1P17861 261 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 NEK4P51957 841 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 AK2P54819 239 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 MIS18BP1Q6P0N0 1132 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 KIAA0319LQ8IZA0 1049 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 CRIPAKQ8N1N5 446 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 CLP1Q92989 425 aaKnown RBP14.64□□□□□ -0.07
TREX1-203ENST00000456089 IGFLR1Q9H665 355 aa14.64□□□□□ -0.07
TREX1-203ENST00000456089 GRXCR2A6NFK2 248 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 C5orf67F2Z3F1 127 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 LINC01565O15544 149 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 SEC24BO95487 1268 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 VTNP04004 478 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 DNAJB1P25685 340 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 DLX2Q07687 328 aaPredicted RBP14.63□□□□□ -0.07
TREX1-203ENST00000456089 HYAL1Q12794 435 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 KIZQ2M2Z5 673 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 NPAS4Q8IUM7 802 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 FAM178BQ8IXR5 827 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 METTL13Q8N6R0 699 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 NEK9Q8TD19 979 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 TNPO1Q92973 898 aaKnown RBP14.63□□□□□ -0.07
TREX1-203ENST00000456089 LENG9Q96B70 501 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 PABPC5Q96DU9 382 aaKnown RBP14.63□□□□□ -0.07
TREX1-203ENST00000456089 ZNF668Q96K58 619 aaPredicted RBP14.63□□□□□ -0.07
TREX1-203ENST00000456089 OSMRQ99650 979 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 C11orf84Q9BUA3 381 aaPredicted RBP14.63□□□□□ -0.07
TREX1-203ENST00000456089 ERVK-5Q9HDB9 667 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 HCSTQ9UBK5 93 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 GABBR1Q9UBS5 961 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 TCEAL9Q9UHQ7 104 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 TPCN1Q9ULQ1 816 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 SQORQ9Y6N5 450 aa14.63□□□□□ -0.07
TREX1-203ENST00000456089 COL1A2P08123 1366 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 CHMP2AO43633 222 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 PFKFB2O60825 505 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 RPS6KA5O75582 802 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 C22orf31O95567 290 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 RB1P06400 928 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 SSTR3P32745 418 aaPredicted RBP14.62□□□□□ -0.07
TREX1-203ENST00000456089 LTBRP36941 435 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 SLC26A2P50443 739 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 CLCN3P51790 818 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 SCRN1Q12765 414 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 CAMK1Q14012 370 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 ZNF484Q5JVG2 852 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 NME8Q8N427 588 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 WASF1Q92558 559 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 LRFN3Q9BTN0 628 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 C1QTNF1Q9BXJ1 281 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 FTHL17Q9BXU8 183 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 C22orf23Q9BZE7 217 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 UPF2Q9HAU5 1272 aaKnown RBP14.62□□□□□ -0.07
TREX1-203ENST00000456089 C11orf16Q9NQ32 467 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 LRFN2Q9ULH4 789 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 SAMM50Q9Y512 469 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 PCDHGC5Q9Y5F6 944 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 KDM3AQ9Y4C1 1321 aa14.62□□□□□ -0.07
TREX1-203ENST00000456089 MSH4O15457 936 aa14.61□□□□□ -0.07
TREX1-203ENST00000456089 RPLP2P05387 115 aaKnown RBP14.61□□□□□ -0.07
TREX1-203ENST00000456089 ITGB1P05556 798 aa14.61□□□□□ -0.07
TREX1-203ENST00000456089 PSAPP07602 524 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms