RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 Q9UFV3 132 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 FAM184BQ9ULE4 1060 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 ATP23Q9Y6H3 246 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 PRODHO43272 600 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 RPS6KA4O75676 772 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 NUDT3O95989 172 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 GCP02774 474 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 FGFR1P11362 822 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 SCNN1GP51170 649 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 CD83Q01151 205 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 RIN1Q13671 783 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 CNGB1Q14028 1251 aaPredicted RBP3.7□□□□□ -1.82
LINC02540-201ENST00000455554 TMEM200BQ69YZ2 307 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 ARHGAP36Q6ZRI8 547 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 ZNF662Q6ZS27 426 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 AARSD1Q9BTE6 412 aaKnown RBP3.7□□□□□ -1.82
LINC02540-201ENST00000455554 CCSER2Q9H7U1 834 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 NRDE2Q9H7Z3 1164 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 BTBD7Q9P203 1132 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 SH3BP1Q9Y3L3 701 aa3.7□□□□□ -1.82
LINC02540-201ENST00000455554 BLACEA4D250 179 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 PRAMEF25A6NGN4 478 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 RHOBTB3O94955 611 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 LMNAP02545 664 aaKnown RBP3.69□□□□□ -1.82
LINC02540-201ENST00000455554 PABPC1P11940 636 aaKnown RBP3.69□□□□□ -1.82
LINC02540-201ENST00000455554 PROZP22891 400 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 MC4RP32245 332 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 PTGS2P35354 604 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 ECE1P42892 770 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 KRTAP10-9P60411 292 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 HERVK_113P62684 666 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 GPR19Q15760 415 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 FIGNQ5HY92 759 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 KANK2Q63ZY3 851 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 NSMFQ6X4W1 530 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 Q6ZRM9 215 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 DPH6Q7L8W6 267 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 OSBP2Q969R2 916 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 ZNF764Q96H86 408 aaPredicted RBP3.69□□□□□ -1.82
LINC02540-201ENST00000455554 SGSM3Q96HU1 749 aa3.69□□□□□ -1.82
LINC02540-201ENST00000455554 A0A1W2PRX2 142 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 TRAF5O00463 557 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 MAN2B1O00754 1011 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 MPIG6BO95866 241 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 C4BPAP04003 597 aaKnown RBP3.68□□□□□ -1.82
LINC02540-201ENST00000455554 ETFBP38117 255 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 MAN2A2P49641 1150 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 STAT5BP51692 787 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 PAK1Q13153 545 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 MOGSQ13724 837 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 TOB2Q14106 344 aaPredicted RBP3.68□□□□□ -1.82
LINC02540-201ENST00000455554 TMCO4Q5TGY1 634 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 MBNL2Q5VZF2 373 aaKnown RBP3.68□□□□□ -1.82
LINC02540-201ENST00000455554 GRAMD4Q6IC98 578 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 LRSAM1Q6UWE0 723 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 EP400NLQ6ZTU2 488 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 MRGPREQ86SM8 312 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 PTRH1Q86Y79 214 aaKnown RBP3.68□□□□□ -1.82
LINC02540-201ENST00000455554 HAS1Q92839 578 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 MIEF2Q96C03 454 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 AMNQ9BXJ7 453 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 OR10A5Q9H207 317 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 CAPN10Q9HC96 672 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 ARHGEF4Q9NR80 690 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 PTGFRNQ9P2B2 879 aa3.68□□□□□ -1.82
LINC02540-201ENST00000455554 IQCA1LA6NCM1 817 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 WNT9AO14904 365 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 AMY2AP04746 511 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 AMY2BP19961 511 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 IFRD2Q12894 506 aaPredicted RBP3.67□□□□□ -1.82
LINC02540-201ENST00000455554 SAFB2Q14151 953 aaKnown RBP eCLIP3.67□□□□□ -1.82
LINC02540-201ENST00000455554 ACAP1Q15027 740 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 GLCCI1Q86VQ1 547 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 PRIMA1Q86XR5 153 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 VPS37DQ86XT2 251 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 RABGGTAQ92696 567 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 RIOX1Q9H6W3 641 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 CATSPERZQ9NTU4 200 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 UCKL1Q9NWZ5 548 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 ASXL2Q76L83 1435 aa3.67□□□□□ -1.82
LINC02540-201ENST00000455554 MASP2O00187 686 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 KRT15P19012 456 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 STAT3P40763 770 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 MFAP1P55081 439 aaKnown RBP3.66□□□□□ -1.82
LINC02540-201ENST00000455554 ZKSCAN2Q63HK3 967 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 OSTM1Q86WC4 334 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 GSPT2Q8IYD1 628 aaKnown RBP3.66□□□□□ -1.82
LINC02540-201ENST00000455554 SLC25A43Q8WUT9 341 aaPredicted RBP3.66□□□□□ -1.82
LINC02540-201ENST00000455554 LPPQ93052 612 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 FBXW5Q969U6 566 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 LENG9Q96B70 501 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 GPR87Q9BY21 358 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 ZNHIT2Q9UHR6 403 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 PACSIN3Q9UKS6 424 aa3.66□□□□□ -1.82
LINC02540-201ENST00000455554 CTDP1Q9Y5B0 961 aaPredicted RBP3.66□□□□□ -1.82
LINC02540-201ENST00000455554 TRAV20A0A0B4J274 112 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 AQP7O14520 342 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 FAM20BO75063 409 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 CLASP2O75122 1294 aaKnown RBP3.65□□□□□ -1.83
LINC02540-201ENST00000455554 ADCY7P51828 1080 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms