RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 KRT76Q01546 638 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 BTG3Q14201 252 aaPredicted RBP18.24■□□□□ 0.51
GPC1-206ENST00000455111 NPY5RQ15761 445 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 PTPROQ16827 1216 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 PPP1R16BQ96T49 567 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 VPS54Q9P1Q0 977 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 PLAGL2Q9UPG8 496 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 PCDHGC5Q9Y5F6 944 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 COL1A2P08123 1366 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 FAM86C2PA6NEL3 165 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 ZNF862O60290 1169 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 GPR32O75388 356 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 ITGB1P05556 798 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 SLC26A2P50443 739 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 CCT2P78371 535 aaKnown RBP18.23■□□□□ 0.51
GPC1-206ENST00000455111 UGCGQ16739 394 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 PAN2Q504Q3 1202 aaKnown RBP18.23■□□□□ 0.51
GPC1-206ENST00000455111 PDXDC2PQ6P474 469 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 ADGRD2Q7Z7M1 963 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 NPAS4Q8IUM7 802 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 REXO1Q8N1G1 1221 aaKnown RBP18.23■□□□□ 0.51
GPC1-206ENST00000455111 LARP6Q9BRS8 491 aaKnown RBP18.23■□□□□ 0.51
GPC1-206ENST00000455111 ZNF577Q9BSK1 485 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 GLT8D2Q9H1C3 349 aa18.23■□□□□ 0.51
GPC1-206ENST00000455111 PI4K2BG5E9Z4 385 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 M0R2N6 131 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 BACH1O14867 736 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 MSH4O15457 936 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 DTNBO60941 627 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 TBX10O75333 385 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 MMP1P03956 469 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 IFNAR1P17181 557 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 PAK2Q13177 524 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 FAM228AQ86W67 206 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 CMTR2Q8IYT2 770 aaKnown RBP18.22■□□□□ 0.51
GPC1-206ENST00000455111 NME8Q8N427 588 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 SPPL3Q8TCT6 385 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 SLC26A6Q9BXS9 759 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 RNF26Q9BY78 433 aaPredicted RBP18.22■□□□□ 0.51
GPC1-206ENST00000455111 CLDND1Q9NY35 253 aa18.22■□□□□ 0.51
GPC1-206ENST00000455111 C9IYK1 514 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 VTNP04004 478 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 DSC3Q14574 896 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 PRR16Q569H4 304 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 ZNF484Q5JVG2 852 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 FAM102BQ5T8I3 360 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 ZNF746Q6NUN9 644 aaPredicted RBP18.21■□□□□ 0.51
GPC1-206ENST00000455111 MIS18BP1Q6P0N0 1132 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 TRMT1LQ7Z2T5 733 aaKnown RBP18.21■□□□□ 0.51
GPC1-206ENST00000455111 AIFM3Q96NN9 605 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 OSMRQ99650 979 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 C11orf84Q9BUA3 381 aaPredicted RBP18.21■□□□□ 0.51
GPC1-206ENST00000455111 FTHL17Q9BXU8 183 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 LMAN2LQ9H0V9 348 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 ZSWIM6Q9HCJ5 1215 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 C6orf50Q9HD87 102 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 RNF19AQ9NV58 838 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 GABBR1Q9UBS5 961 aa18.21■□□□□ 0.51
GPC1-206ENST00000455111 CCDC196A0A1B0GTZ2 297 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 STBD1O95210 358 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 RPLP2P05387 115 aaKnown RBP18.2■□□□□ 0.5
GPC1-206ENST00000455111 CLCN3P51790 818 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 FGD1P98174 961 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 NFX1Q12986 1120 aaKnown RBP18.2■□□□□ 0.5
GPC1-206ENST00000455111 KIZQ2M2Z5 673 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 FAM160B1Q5W0V3 765 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 B3GNT9Q6UX72 402 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 GJD3Q8N144 294 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 KLHL23Q8NBE8 558 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 BBXQ8WY36 941 aaPredicted RBP18.2■□□□□ 0.5
GPC1-206ENST00000455111 P2RX5Q93086 422 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 CEP89Q96ST8 783 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 C1QTNF1Q9BXJ1 281 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 RGS18Q9NS28 235 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 TBC1D22BQ9NU19 505 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 ST3GAL5Q9UNP4 418 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 GINS2Q9Y248 185 aa18.2■□□□□ 0.5
GPC1-206ENST00000455111 C19orf67A6NJJ6 358 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 SARSP49591 514 aaKnown RBP18.19■□□□□ 0.5
GPC1-206ENST00000455111 SETQ01105 290 aaPredicted RBP18.19■□□□□ 0.5
GPC1-206ENST00000455111 ZP2Q05996 745 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 CLUL1Q15846 466 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 RUFY3Q7L099 469 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 SLC5A5Q92911 643 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 ZNF668Q96K58 619 aaPredicted RBP18.19■□□□□ 0.5
GPC1-206ENST00000455111 ADAM2Q99965 735 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 PLVAPQ9BX97 442 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 ADAMTS10Q9H324 1103 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 RWDD3Q9Y3V2 267 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 PCDHA10Q9Y5I2 948 aa18.19■□□□□ 0.5
GPC1-206ENST00000455111 TMEM150BA6NC51 233 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 M0QZ92 97 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 GPR37L1O60883 481 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 RPS6KA5O75582 802 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 GLP2RO95838 553 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 IBSPP21815 317 aaPredicted RBP18.18■□□□□ 0.5
GPC1-206ENST00000455111 FAM189BP81408 668 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 ADAM15Q13444 863 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 DRP2Q13474 957 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 SMAP1Q8IYB5 467 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms