RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 CDHR5Q9HBB8 845 aa11.34□□□□□ -0.59
CLCN4-204ENST00000454850 ERVK-5Q9HDB9 667 aa11.34□□□□□ -0.59
CLCN4-204ENST00000454850 SLC9A2Q9UBY0 812 aa11.34□□□□□ -0.59
CLCN4-204ENST00000454850 NOC2LQ9Y3T9 749 aaKnown RBP11.34□□□□□ -0.59
CLCN4-204ENST00000454850 NR2E1Q9Y466 385 aa11.34□□□□□ -0.59
CLCN4-204ENST00000454850 UBIAD1Q9Y5Z9 338 aa11.34□□□□□ -0.59
CLCN4-204ENST00000454850 TAF6LQ9Y6J9 622 aa11.34□□□□□ -0.59
CLCN4-204ENST00000454850 C2orf16Q68DN1 1984 aa11.34□□□□□ -0.59
CLCN4-204ENST00000454850 DENND4AQ7Z401 1863 aa11.34□□□□□ -0.59
CLCN4-204ENST00000454850 SMIM35A0A1B0GVV1 85 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 hCG_1642624A0A1W2PR95 340 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 HIDE1A8MVS5 230 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 C2CD4DB7Z1M9 353 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 PROB1E7EW31 1015 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 PLEKHA8P1O95397 391 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 CYP21A2P08686 494 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 LAG3P18627 525 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 CA8P35219 290 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 PBX3P40426 434 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 PDE12Q6L8Q7 609 aaKnown RBP11.33□□□□□ -0.6
CLCN4-204ENST00000454850 MTHFD1LQ6UB35 978 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 FRMD5Q7Z6J6 570 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 CMTR1Q8N1G2 835 aaKnown RBP11.33□□□□□ -0.6
CLCN4-204ENST00000454850 CTCFLQ8NI51 663 aaPredicted RBP11.33□□□□□ -0.6
CLCN4-204ENST00000454850 SPZ1Q9BXG8 430 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 MFSD1Q9H3U5 465 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 POMKQ9H5K3 350 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 CWH43Q9H720 699 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 PSTPIP2Q9H939 334 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 SORCS3Q9UPU3 1222 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 CACNA1BQ00975 2339 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 KDM3AQ9Y4C1 1321 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 CEP250Q9BV73 2442 aa11.33□□□□□ -0.6
CLCN4-204ENST00000454850 SPDYE3A6NKU9 549 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 C9IYK1 514 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 E7EWF7 191 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 ASGR2P07307 311 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 WEE2P0C1S8 567 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 PDE4AP27815 886 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 KIF5BP33176 963 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 STAT5BP51692 787 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 NUBP1P53384 320 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 ACTR2P61160 394 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 KCNC3Q14003 757 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 TMEM184AQ6ZMB5 413 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 TMC7Q7Z402 723 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 UBALD2Q8IYN6 164 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 NCOA7Q8NI08 942 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 TMEM40Q8WWA1 233 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 MRPS27Q92552 414 aaKnown RBP11.32□□□□□ -0.6
CLCN4-204ENST00000454850 TNPO1Q92973 898 aaKnown RBP11.32□□□□□ -0.6
CLCN4-204ENST00000454850 SDF4Q9BRK5 362 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 OSBPL3Q9H4L5 887 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 ATP6V0A4Q9HBG4 840 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 JADE2Q9NQC1 790 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 RGS18Q9NS28 235 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 C1orf112Q9NSG2 853 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
CLCN4-204ENST00000454850 ST3GAL5Q9UNP4 418 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
CLCN4-204ENST00000454850 DNAH14Q0VDD8 3507 aa11.32□□□□□ -0.6
CLCN4-204ENST00000454850 DDX39AO00148 427 aaKnown RBP11.31□□□□□ -0.6
CLCN4-204ENST00000454850 RXRAP19793 462 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 KLRC1P26715 233 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 NBL1P41271 181 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 ANTXR2P58335 489 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 PTH1RQ03431 593 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 KIZQ2M2Z5 673 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 CES5AQ6NT32 575 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 SLC24A5Q71RS6 500 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 RAB11FIP4Q86YS3 637 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 SMC5Q8IY18 1101 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 ZNF654Q8IZM8 581 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 NME8Q8N427 588 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 SRBD1Q8N5C6 995 aaKnown RBP11.31□□□□□ -0.6
CLCN4-204ENST00000454850 CASP10Q92851 521 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 OSMRQ99650 979 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 KCNH7Q9NS40 1196 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
CLCN4-204ENST00000454850 PCDHA6Q9UN73 950 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 LZTS1Q9Y250 596 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 NCOR2Q9Y618 2525 aa11.31□□□□□ -0.6
CLCN4-204ENST00000454850 SPTBN2O15020 2390 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 BACH1O14867 736 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 GPR182O15218 404 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 DDAH1O94760 285 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 HOXB8P17481 243 aaPredicted RBP11.3□□□□□ -0.6
CLCN4-204ENST00000454850 ID4P47928 161 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 NUCB1Q02818 461 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 RARS2Q5T160 578 aaKnown RBP11.3□□□□□ -0.6
CLCN4-204ENST00000454850 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
CLCN4-204ENST00000454850 KCNT2Q6UVM3 1135 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 NFXL1Q6ZNB6 911 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 LRRC55Q6ZSA7 311 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 PLPPR4Q7Z2D5 763 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 FAM228AQ86W67 206 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 ADSSL1Q8N142 457 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms