RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TTLL4Q14679 1199 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 LRRC41Q15345 812 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 TARBP2Q15633 366 aaKnown RBP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 CCL14Q16627 93 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 HSDL1Q3SXM5 330 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 HERC4Q5GLZ8 1057 aaPredicted RBP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 FAM26FQ5R3K3 315 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 GJC2Q5T442 439 aaPredicted RBP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 UTP14CQ5TAP6 766 aaKnown RBP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 CDKAL1Q5VV42 579 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 OLFML2BQ68BL8 750 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 PLA2G4FQ68DD2 849 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ANKRD40Q6AI12 368 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 CENPPQ6IPU0 288 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 TTI2Q6NXR4 508 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 PADI6Q6TGC4 694 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 APTXQ7Z2E3 356 aaKnown RBP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 SFR1Q86XK3 245 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 IRF2BP1Q8IU81 584 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 DHX37Q8IY37 1157 aaKnown RBP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 AFAP1L1Q8TED9 768 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ATP6V0A1Q93050 837 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 P2RX5Q93086 422 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 SH2D3AQ9BRG2 576 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 NIFKQ9BYG3 293 aaKnown RBP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ARHGAP39Q9C0H5 1083 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 SEMA6BQ9H3T3 888 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ABHD16BQ9H3Z7 469 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 MLXIPQ9HAP2 919 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ZNF302Q9NR11 478 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 SLC5A4Q9NY91 659 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 TBC1D7Q9P0N9 293 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ODF2LQ9ULJ1 636 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 NFE2L3Q9Y4A8 694 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 SYNRGQ9UMZ2 1314 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ANK1P16157 1881 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 SCN10AQ9Y5Y9 1956 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 TNPO2O14787 897 aaKnown RBP6.65□□□□□ -1.34
SDC4P-201ENST00000453285 PSMA7O14818 248 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 HIP1RO75146 1068 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 TBC1D8O95759 1140 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 GH1P01241 217 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 OATP04181 439 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 KRT18P05783 430 aaKnown RBP6.65□□□□□ -1.34
SDC4P-201ENST00000453285 ZNF865P0CJ78 1059 aaPredicted RBP6.65□□□□□ -1.34
SDC4P-201ENST00000453285 SMPD1P17405 629 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 CYP2B6P20813 491 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 TCF7P36402 384 aaPredicted RBP6.65□□□□□ -1.34
SDC4P-201ENST00000453285 MAP2K2P36507 400 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 RGS2P41220 211 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 VEGFBP49765 207 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 STAT5BP51692 787 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 HTRA3P83110 453 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 LACTBP83111 547 aaPredicted RBP6.65□□□□□ -1.34
SDC4P-201ENST00000453285 FANCCQ00597 558 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 PRKCEQ02156 737 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 CCDC173Q0VFZ6 552 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 STIM1Q13586 685 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 LAMC2Q13753 1193 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 DUSP28Q4G0W2 176 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 ZCWPW2Q504Y3 356 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 XKR9Q5GH70 373 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 XKR3Q5GH77 459 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 PRAMEF19Q5SWL8 479 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 IQSEC1Q6DN90 963 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 FOXR2Q6PJQ5 311 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 OTUD6AQ7L8S5 288 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 PLPPR4Q7Z2D5 763 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 MYOCDQ8IZQ8 938 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 ZNF507Q8TCN5 953 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 SCFD1Q8WVM8 642 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 SOCS4Q8WXH5 440 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 EMID1Q96A84 441 aaPredicted RBP6.65□□□□□ -1.34
SDC4P-201ENST00000453285 TRIM47Q96LD4 638 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 SPATA33Q96N06 139 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 STRA6Q9BX79 667 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 KCTD10Q9H3F6 313 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 XPNPEP1Q9NQW7 623 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 CYP26B1Q9NR63 512 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 OLFML3Q9NRN5 406 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 RNF186Q9NXI6 227 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 GABRQQ9UN88 632 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 COL4A3BPQ9Y5P4 624 aa6.65□□□□□ -1.34
SDC4P-201ENST00000453285 EMSYQ7Z589 1322 aa6.65□□□□□ -1.35
SDC4P-201ENST00000453285 LRRC10BA6NIK2 292 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 NKRFO15226 690 aaKnown RBP eCLIP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 USO1O60763 962 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 TBCAO75347 108 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 PPP1R37O75864 691 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 PRPF6O94906 941 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 FAM13AO94988 1023 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 MYBP10242 640 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 MAPTP10636 758 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 XRCC5P13010 732 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 HOXD8P13378 290 aaPredicted RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 CDC25BP30305 580 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 NMT1P30419 496 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 CYP2C19P33261 490 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 PSMC4P43686 418 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 FCGRTP55899 365 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms