RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 JADE2Q9NQC1 790 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 OLFML3Q9NRN5 406 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 CEP72Q9P209 647 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 MYO1AQ9UBC5 1043 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 FAM184BQ9ULE4 1060 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 AFPP02771 609 aaKnown RBP12.93□□□□□ -0.34
VTA1-203ENST00000452973 MAGEA1P43355 309 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 VAV2P52735 878 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 HIRAP54198 1017 aaPredicted RBP12.93□□□□□ -0.34
VTA1-203ENST00000452973 FOXR2Q6PJQ5 311 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 ZNF720Q7Z2F6 126 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 IQCDQ96DY2 449 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 SPAG5Q96R06 1193 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 PDCD2LQ9BRP1 358 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 UBIAD1Q9Y5Z9 338 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 K7ENM7 598 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 TLR2O60603 784 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 MOCS3O95396 460 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 P4HBP07237 508 aaKnown RBP12.93□□□□□ -0.34
VTA1-203ENST00000452973 ZSCAN20P17040 1043 aaPredicted RBP12.93□□□□□ -0.34
VTA1-203ENST00000452973 UGCGQ16739 394 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 SECISBP2LQ93073 1101 aaKnown RBP12.93□□□□□ -0.34
VTA1-203ENST00000452973 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 PXMP2Q9NR77 195 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 GPRC5DQ9NZD1 345 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 RPTORQ8N122 1335 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 TISP43B9A030 160 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 BUB1O43683 1085 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 H2AFXP16104 143 aaPredicted RBP12.92□□□□□ -0.34
VTA1-203ENST00000452973 HNRNPH3P31942 346 aaKnown RBP12.92□□□□□ -0.34
VTA1-203ENST00000452973 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
VTA1-203ENST00000452973 EXOC3L4Q17RC7 722 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 PLA2G4FQ68DD2 849 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 GJB7Q6PEY0 223 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 B3GNT9Q6UX72 402 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 HS2ST1Q7LGA3 356 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 FRMD5Q7Z6J6 570 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 APOBEC3FQ8IUX4 373 aaKnown RBP12.92□□□□□ -0.34
VTA1-203ENST00000452973 CEP112Q8N8E3 955 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 PCIF1Q9H4Z3 704 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 GPRC5CQ9NQ84 441 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 PRDM10Q9NQV6 1147 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 ARGLU1Q9NWB6 273 aaPredicted RBP12.92□□□□□ -0.34
VTA1-203ENST00000452973 FRMPD4Q14CM0 1322 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 DDNO94850 711 aaPredicted RBP12.92□□□□□ -0.34
VTA1-203ENST00000452973 QARSP47897 775 aaKnown RBP12.92□□□□□ -0.34
VTA1-203ENST00000452973 NPEPPSP55786 919 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 CDK17Q00537 523 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 RSRC2Q7L4I2 434 aaKnown RBP12.92□□□□□ -0.34
VTA1-203ENST00000452973 CCDC125Q86Z20 511 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 FAM186BQ8IYM0 893 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 ADAMTS1Q9UHI8 967 aa12.92□□□□□ -0.34
VTA1-203ENST00000452973 ZNF185O15231 689 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 PNMA6AP0CW24 399 aaPredicted RBP12.91□□□□□ -0.34
VTA1-203ENST00000452973 YWHABP31946 246 aaKnown RBP12.91□□□□□ -0.34
VTA1-203ENST00000452973 DNA2P51530 1060 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 KLHL30Q0D2K2 578 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 HGSNATQ68CP4 663 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 TMCO3Q6UWJ1 677 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 DNAAF5Q86Y56 855 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 DAW1Q8N136 415 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 CAPN6Q9Y6Q1 641 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 ZMYM2Q9UBW7 1377 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 CTAGE15A4D2H0 777 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 CTAGE8P0CG41 777 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 BCRP11274 1271 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 TMEM132BQ14DG7 1078 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 CTAGE6Q86UF2 777 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 TEX2Q8IWB9 1127 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 CTAGE4Q8IX94 777 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 GPR161Q8N6U8 529 aaKnown RBP12.91□□□□□ -0.34
VTA1-203ENST00000452973 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 KLRG1Q96E93 195 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 FIZ1Q96SL8 496 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 GBP3Q9H0R5 595 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 TMOD4Q9NZQ9 345 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 GCNT4Q9P109 453 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 FHOD1Q9Y613 1164 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 SAR1BQ9Y6B6 198 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 NR3C2P08235 984 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 TRIM49P0CI25 452 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 TRIM49CP0CI26 452 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 PON1P27169 355 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 BMT2Q1RMZ1 405 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 XKR9Q5GH70 373 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 SLC35C1Q96A29 364 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 LTBP3Q9NS15 1303 aa12.91□□□□□ -0.34
VTA1-203ENST00000452973 EXOC3O60645 756 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 CCNE2O96020 404 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 UCHL3P15374 230 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 PSMC2P35998 433 aaKnown RBP12.9□□□□□ -0.34
VTA1-203ENST00000452973 RARRES1P49788 294 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 ASIC2Q16515 512 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 STXBP4Q6ZWJ1 553 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 ZC3H3Q8IXZ2 948 aaKnown RBP12.9□□□□□ -0.34
VTA1-203ENST00000452973 EHBP1Q8NDI1 1231 aa12.9□□□□□ -0.34
VTA1-203ENST00000452973 CAGE1Q8TC20 777 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms