RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 GGA1Q9UJY5 639 aa13.73□□□□□ -0.21
THUMPD3-206ENST00000452837 NOVA2Q9UNW9 492 aaKnown RBP13.73□□□□□ -0.21
THUMPD3-206ENST00000452837 TRAF3IP3Q9Y228 551 aa13.73□□□□□ -0.21
THUMPD3-206ENST00000452837 ATXN2Q99700 1313 aaKnown RBP13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 CES2O00748 559 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 RGL2O15211 777 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 JAM2P57087 298 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 BYSLQ13895 437 aaKnown RBP13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 DCAF12L1Q5VU92 463 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 PRR5LQ6MZQ0 368 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 LRIG3Q6UXM1 1119 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 SLFN11Q7Z7L1 901 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 KSR1Q8IVT5 923 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 SLC35C1Q96A29 364 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 PCDHB13Q9Y5F0 798 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 H0YHG0 523 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 XRCC5P13010 732 aaKnown RBP13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 CUL1Q13616 776 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 UBAP2Q5T6F2 1119 aaKnown RBP13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 FRMD5Q7Z6J6 570 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 DAAM2Q86T65 1068 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 ZFPM1Q8IX07 1006 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 CERS5Q8N5B7 392 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 CYP2W1Q8TAV3 490 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 ETNPPLQ8TBG4 499 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 RUSC1Q9BVN2 902 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 CD248Q9HCU0 757 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 GCNT4Q9P109 453 aa13.72□□□□□ -0.21
THUMPD3-206ENST00000452837 MEIS2O14770 477 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 RIMBP2O15034 1052 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 CLSTN1O94985 981 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 PRKCIP41743 596 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 SCNN1DP51172 638 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 GALCP54803 685 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 SF3A3Q12874 501 aaKnown RBP eCLIP13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 SWT1Q5T5J6 900 aaKnown RBP13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 TMC3Q7Z5M5 1100 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 CCDC13Q8IYE1 715 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 RASGEF1CQ8N431 466 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 TBC1D16Q8TBP0 767 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 MDM1Q8TC05 714 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 OSBPL7Q9BZF2 842 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 PPP1R9AQ9ULJ8 1098 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 PCDHA1Q9Y5I3 950 aa13.71□□□□□ -0.21
THUMPD3-206ENST00000452837 GOLGA6L10A6NI86 522 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 FAM86B1E9PN63 330 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 NR3C1P04150 777 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 FAM86B2P0C5J1 330 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 MAGOHP61326 146 aaKnown RBP13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 POU5F1Q01860 360 aaKnown RBP13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 ATP8B4Q8TF62 1192 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 RAPGEF5Q92565 580 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 MAGOHBQ96A72 148 aaKnown RBP13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 LENG9Q96B70 501 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 CEP89Q96ST8 783 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 ERVK-5Q9HDB9 667 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 SERPINB13Q9UIV8 391 aa13.71□□□□□ -0.22
THUMPD3-206ENST00000452837 DNM1LO00429 736 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 TRAPPC3O43617 180 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 BUB1BO60566 1050 aaPredicted RBP13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 H2AFZP0C0S5 128 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 ACTN3Q08043 901 aaPredicted RBP13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 DHX9Q08211 1270 aaKnown RBP13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 NFIAQ12857 509 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 AADACL2Q6P093 401 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 H2AFVQ71UI9 128 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 PALB2Q86YC2 1186 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 PITPNM2Q9BZ72 1349 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 GMNCA6NCL1 334 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 PHF20L1A8MW92 1017 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 ZBTB39O15060 712 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 FLOT1O75955 427 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 FGGP02679 453 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 SHBGP04278 402 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 ABCB4P21439 1286 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 COG2Q14746 738 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 C10orf76Q5T2E6 689 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 YTHDF3Q7Z739 585 aaKnown RBP13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 LRRC45Q96CN5 670 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 HES6Q96HZ4 224 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 CALR3Q96L12 384 aaKnown RBP13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 BHMT2Q9H2M3 363 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 DNAJC18Q9H819 358 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 VCPKMTQ9H867 229 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 TAS2R14Q9NYV8 317 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 RGL1Q9NZL6 768 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 BCS1LQ9Y276 419 aa13.7□□□□□ -0.22
THUMPD3-206ENST00000452837 F8VZ95 297 aa13.69□□□□□ -0.22
THUMPD3-206ENST00000452837 C6orf229H3BNL8 230 aa13.69□□□□□ -0.22
THUMPD3-206ENST00000452837 TGFB1I1O43294 461 aa13.69□□□□□ -0.22
THUMPD3-206ENST00000452837 EVI5O60447 810 aa13.69□□□□□ -0.22
THUMPD3-206ENST00000452837 ATP2B4P23634 1241 aa13.69□□□□□ -0.22
THUMPD3-206ENST00000452837 ARHGAP4P98171 946 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms