RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 COL25A1Q9BXS0 654 aaPredicted RBP18.1■□□□□ 0.49
SGCE-208ENST00000450385 FAM49AQ9H0Q0 323 aaPredicted RBP18.1■□□□□ 0.49
SGCE-208ENST00000450385 SUGCTQ9HAC7 445 aa18.1■□□□□ 0.49
SGCE-208ENST00000450385 GABBR1Q9UBS5 961 aa18.1■□□□□ 0.49
SGCE-208ENST00000450385 NCOR1O75376 2440 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 CCDC194A0A1B0GVG4 234 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 ZBTB42B2RXF5 422 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 TBX3O15119 743 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 GPR182O15218 404 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 LPXNO60711 386 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 DKC1O60832 514 aaKnown RBP eCLIP18.09■□□□□ 0.49
SGCE-208ENST00000450385 PSMD10O75832 226 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 STAG3L1P0CL83 205 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 CRYBB1P53674 252 aaPredicted RBP18.09■□□□□ 0.49
SGCE-208ENST00000450385 PAK2Q13177 524 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 PTPROQ16827 1216 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 FBXO22Q8NEZ5 403 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 CERS4Q9HA82 394 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 BRMS1Q9HCU9 246 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 PADI3Q9ULW8 664 aa18.09■□□□□ 0.49
SGCE-208ENST00000450385 NLRC5Q86WI3 1866 aa18.08■□□□□ 0.49
SGCE-208ENST00000450385 EPOPA6NHQ4 379 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 ARHGEF15O94989 841 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 AK2P54819 239 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 CCDC85BQ15834 202 aaPredicted RBP18.08■□□□□ 0.48
SGCE-208ENST00000450385 FAM117BQ6P1L5 589 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 B3GNT9Q6UX72 402 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 TMCO2Q7Z6W1 182 aaPredicted RBP18.08■□□□□ 0.48
SGCE-208ENST00000450385 EXOC8Q8IYI6 725 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 FIBCD1Q8N539 461 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 TRAPPC12Q8WVT3 735 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 PPM1EQ8WY54 764 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 CLP1Q92989 425 aaKnown RBP18.08■□□□□ 0.48
SGCE-208ENST00000450385 LARP6Q9BRS8 491 aaKnown RBP18.08■□□□□ 0.48
SGCE-208ENST00000450385 OSBPL7Q9BZF2 842 aa18.08■□□□□ 0.48
SGCE-208ENST00000450385 AGO3Q9H9G7 860 aaKnown RBP18.08■□□□□ 0.48
SGCE-208ENST00000450385 ORC3Q9UBD5 711 aaPredicted RBP18.08■□□□□ 0.48
SGCE-208ENST00000450385 MUC3AQ02505 3323 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 C5orf67F2Z3F1 127 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 H3BNC9 293 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 PPFIA3O75145 1194 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 UPP2O95045 317 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 C22orf31O95567 290 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 OATP04181 439 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 NEK4P51957 841 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 EPC2Q52LR7 807 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 NAALADL2Q58DX5 795 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 NEK8Q86SG6 692 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 CRIPAKQ8N1N5 446 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 ETNPPLQ8TBG4 499 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 GTF3C6Q969F1 213 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 ZNF689Q96CS4 500 aaPredicted RBP18.07■□□□□ 0.48
SGCE-208ENST00000450385 PLVAPQ9BX97 442 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 NIFKQ9BYG3 293 aaKnown RBP18.07■□□□□ 0.48
SGCE-208ENST00000450385 C1orf112Q9NSG2 853 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 DDX25Q9UHL0 483 aaKnown RBP18.07■□□□□ 0.48
SGCE-208ENST00000450385 PPME1Q9Y570 386 aa18.07■□□□□ 0.48
SGCE-208ENST00000450385 RFXAPO00287 272 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 RPS6KA5O75582 802 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 DGKIO75912 1065 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 CD52P31358 61 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 XKR3Q5GH77 459 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 MIER3Q7Z3K6 550 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 TMEM192Q8IY95 271 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 MRPL38Q96DV4 380 aaKnown RBP18.06■□□□□ 0.48
SGCE-208ENST00000450385 MAP7D2Q96T17 732 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 JPH2Q9BR39 696 aaPredicted RBP18.06■□□□□ 0.48
SGCE-208ENST00000450385 LMAN2LQ9H0V9 348 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 UNC45AQ9H3U1 944 aa18.06■□□□□ 0.48
SGCE-208ENST00000450385 NCK2O43639 380 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 PPP2R5CQ13362 524 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 ME3Q16798 604 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 SLFN12Q8IYM2 578 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 CMTR2Q8IYT2 770 aaKnown RBP18.05■□□□□ 0.48
SGCE-208ENST00000450385 METTL13Q8N6R0 699 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 HLA-CQ95604 372 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 AIFM3Q96NN9 605 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 RC3H2Q9HBD1 1191 aaKnown RBP18.05■□□□□ 0.48
SGCE-208ENST00000450385 KCNMB3Q9NPA1 279 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 KCNJ14Q9UNX9 436 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 TTC28Q96AY4 2481 aa18.05■□□□□ 0.48
SGCE-208ENST00000450385 ADGRA3Q8IWK6 1321 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 COL4A4P53420 1690 aaPredicted RBP18.04■□□□□ 0.48
SGCE-208ENST00000450385 ZNF862O60290 1169 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 GPR32O75388 356 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 BAG4O95429 457 aaKnown RBP18.04■□□□□ 0.48
SGCE-208ENST00000450385 CTDNEP1O95476 244 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 BMPR1AP36894 532 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 DNM2P50570 870 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 PRKCEQ02156 737 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 SKIV2LQ15477 1246 aaKnown RBP18.04■□□□□ 0.48
SGCE-208ENST00000450385 TARBP2Q15633 366 aaKnown RBP18.04■□□□□ 0.48
SGCE-208ENST00000450385 INF2Q27J81 1249 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 LETM2Q2VYF4 491 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 EFCAB12Q6NXP0 572 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 SLC24A5Q71RS6 500 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 RTN4RL1Q86UN2 441 aaPredicted RBP18.04■□□□□ 0.48
SGCE-208ENST00000450385 MICALL1Q8N3F8 863 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 LINC01465Q8N7H1 131 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms