RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RCN2Q14257 317 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 NAB2Q15742 525 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 ASTE1Q2TB18 679 aaPredicted RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 RRAGAQ7L523 313 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 DZIP3Q86Y13 1208 aaKnown RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 CCNJLQ8IV13 435 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 APPBP2Q92624 585 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 MKL1Q969V6 931 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 ZNF333Q96JL9 665 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 MYD88Q99836 296 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 LZTS2Q9BRK4 669 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 AP1M1Q9BXS5 423 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 DDX47Q9H0S4 455 aaKnown RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 CARD9Q9H257 536 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 AZI2Q9H6S1 392 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 DDX21Q9NR30 783 aaKnown RBP eCLIP9.34□□□□□ -0.91
LSM5-208ENST00000450169 TXLNGQ9NUQ3 528 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 NMRK1Q9NWW6 199 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 BZW2Q9Y6E2 419 aaKnown RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 SLC4A7Q9Y6M7 1214 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 USP54Q70EL1 1684 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 TLDC2A0PJX2 215 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 H0Y3Z8 333 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 RBAK-RBAKDNI3L0D1 243 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 CETN3O15182 167 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 MAFGO15525 162 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 PFDN1O60925 122 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 TMCC1O94876 653 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 AGTP01019 485 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 SKIP12755 728 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 RPL13P26373 211 aaKnown RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 LIFRP42702 1097 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 IFI35P80217 286 aaPredicted RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 RNASELQ05823 741 aaKnown RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 PABPC4Q13310 644 aaKnown RBP eCLIP9.34□□□□□ -0.917e-10■□□□□ 11.1
LSM5-208ENST00000450169 SLC39A6Q13433 755 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 CNGA2Q16280 664 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 RASIP1Q5U651 963 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 CEP128Q6ZU80 1094 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 ZNF365Q70YC5 407 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 AGGF1Q8N302 714 aaeCLIP9.34□□□□□ -0.91
LSM5-208ENST00000450169 LZICQ8WZA0 190 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 NCSTNQ92542 709 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 FMO2Q99518 471 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 DUSP9Q99956 384 aaKnown RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 LRMDAQ9H2I8 198 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 GPR108Q9NPR9 543 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 LUC7LQ9NQ29 371 aaKnown RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 FAM114A2Q9NRY5 505 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 RHBDL2Q9NX52 303 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 PDP2Q9P2J9 529 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 SSU72P8A0A1W2PR75 194 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 MAGEA13PA6NCF6 341 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 PALM3A6NDB9 673 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 SMIM23A6NLE4 172 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 TCP11X1B4DZS4 312 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 PGRMC1O00264 195 aaKnown RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 WNT7AO00755 349 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 HGSO14964 777 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 TJP3O95049 919 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 HOXC9P31274 260 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 BPIFB4P59827 614 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 USP46P62068 366 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 RASA3Q14644 834 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 RPS6KA1Q15418 735 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 ZNF174Q15697 407 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 RTN1Q16799 776 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 CNPY1Q3B7I2 92 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 TDRD12Q587J7 1177 aaKnown RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 EARS2Q5JPH6 523 aaKnown RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 DENND2CQ68D51 928 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 GALNT17Q6IS24 598 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 RNF168Q8IYW5 571 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 FAM13CQ8NE31 585 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 SUPT20HQ8NEM7 779 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 NEK9Q8TD19 979 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 ACTRT1Q8TDG2 376 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 ATP8B4Q8TF62 1192 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 SEC14L1Q92503 715 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 RMDN2Q96LZ7 410 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 TXLNGYQ9BZA5 131 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 CCDC87Q9NVE4 849 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 AMACRQ9UHK6 382 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 MROH7Q68CQ1 1323 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 NID2Q14112 1375 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 SIGLEC16A6NMB1 481 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 CCDC188H7C350 402 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 CEP104O60308 925 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 ATP9AO75110 1047 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 AFPP02771 609 aaKnown RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 CCDC166P0CW27 439 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 EIF4BP23588 611 aaKnown RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 KLRC1P26715 233 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 VHLP40337 213 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 ATP2C1P98194 919 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 KCTD19Q17RG1 926 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 IER5LQ5T953 404 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 ATG9AQ7Z3C6 839 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms