RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 IGSF9BQ9UPX0 1349 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 ZNFX1Q9P2E3 1918 aaKnown RBP15.75■□□□□ 0.11
USP39-207ENST00000450066 LGALS16A8MUM7 142 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 GCNT3O95395 438 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 TPM2P07951 284 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 ADORA2AP29274 412 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 HOXD13P35453 343 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 PTPN21Q16825 1174 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 ZNF792Q3KQV3 632 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 XKR9Q5GH70 373 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 ODR4Q5SWX8 454 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 EEPD1Q7L9B9 569 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 ZNF720Q7Z2F6 126 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 CEP63Q96MT8 703 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 FIZ1Q96SL8 496 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 TRAF3IP3Q9Y228 551 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 IVNS1ABPQ9Y6Y0 642 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 DOCK5Q9H7D0 1870 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 ITIH6Q6UXX5 1313 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 IGKV6D-21A0A0A0MT36 114 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 TMEM150BA6NC51 233 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 PDXKO00764 312 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 SORBS3O60504 671 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 USO1O60763 962 aaKnown RBP15.74■□□□□ 0.11
USP39-207ENST00000450066 NPEPPSP55786 919 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 METTL7BQ6UX53 244 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 STXBP4Q6ZWJ1 553 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 FAM178BQ8IXR5 827 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 ZC3H3Q8IXZ2 948 aaKnown RBP15.74■□□□□ 0.11
USP39-207ENST00000450066 DRC1Q96MC2 740 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 LARSQ9P2J5 1176 aaKnown RBP15.74■□□□□ 0.11
USP39-207ENST00000450066 DDX41Q9UJV9 622 aaKnown RBP15.74■□□□□ 0.11
USP39-207ENST00000450066 MAFBQ9Y5Q3 323 aaPredicted RBP15.74■□□□□ 0.11
USP39-207ENST00000450066 UBE4BO95155 1302 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 PRPF6O94906 941 aaKnown RBP15.74■□□□□ 0.11
USP39-207ENST00000450066 PRKCSHP14314 528 aaPredicted RBP15.74■□□□□ 0.11
USP39-207ENST00000450066 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
USP39-207ENST00000450066 PLA2G4FQ68DD2 849 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 ZNF467Q7Z7K2 595 aaPredicted RBP15.74■□□□□ 0.11
USP39-207ENST00000450066 KIAA1524Q8TCG1 905 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 PYCARDQ9ULZ3 195 aa15.74■□□□□ 0.11
USP39-207ENST00000450066 WDR81Q562E7 1941 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 GGPS1O95749 300 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 MAPTP10636 758 aaKnown RBP15.73■□□□□ 0.11
USP39-207ENST00000450066 NMT1P30419 496 aaKnown RBP15.73■□□□□ 0.11
USP39-207ENST00000450066 MAPK4P31152 587 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 PRKCEQ02156 737 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 UBXN1Q04323 297 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 LY6KQ17RY6 165 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 XKR3Q5GH77 459 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 GPR142Q7Z601 462 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 SH2D3AQ9BRG2 576 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 ZNF302Q9NR11 478 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 PCDHB13Q9Y5F0 798 aa15.73■□□□□ 0.11
USP39-207ENST00000450066 PLXNB2O15031 1838 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 A0A1W2PQC6 194 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 GSTTP1A0A1W2PQM5 241 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
USP39-207ENST00000450066 CALUO43852 315 aaPredicted RBP15.72■□□□□ 0.11
USP39-207ENST00000450066 ARIH2O95376 493 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 GNA14O95837 355 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 SLC10A3P09131 477 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 SKILP12757 684 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 PLS3P13797 630 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 DNM2P50570 870 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 INHBEP58166 350 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 CCZ1BP86790 482 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 CCZ1P86791 482 aaPredicted RBP15.72■□□□□ 0.11
USP39-207ENST00000450066 CCDC62Q6P9F0 684 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 ARMCX2Q7L311 632 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 TRMT1LQ7Z2T5 733 aaKnown RBP15.72■□□□□ 0.11
USP39-207ENST00000450066 FBXO16Q8IX29 292 aaPredicted RBP15.72■□□□□ 0.11
USP39-207ENST00000450066 CEP170P1Q96L14 293 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 NOC4LQ9BVI4 516 aaKnown RBP15.72■□□□□ 0.11
USP39-207ENST00000450066 STRA6Q9BX79 667 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 MLXIPQ9HAP2 919 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 TYW1Q9NV66 732 aaKnown RBP15.72■□□□□ 0.11
USP39-207ENST00000450066 CLCN1P35523 988 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 ADAM9Q13443 819 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 ALCAMQ13740 583 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 GRB14Q14449 540 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 MIIPQ5JXC2 388 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 CELF3Q5SZQ8 465 aaKnown RBP15.72■□□□□ 0.11
USP39-207ENST00000450066 MAEAQ7L5Y9 396 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 PLEKHH3Q7Z736 793 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 SEPT1Q8WYJ6 367 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 DIS3Q9Y2L1 958 aaKnown RBP15.72■□□□□ 0.11
USP39-207ENST00000450066 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.72■□□□□ 0.117e-6■■□□□ 12.1
USP39-207ENST00000450066 ADGRA2Q96PE1 1338 aa15.72■□□□□ 0.11
USP39-207ENST00000450066 CETN3O15182 167 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 NRDCO43847 1150 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 PPP1R37O75864 691 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 DGAT1O75907 488 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 MARSP56192 900 aaKnown RBP15.71■□□□□ 0.11
USP39-207ENST00000450066 KCNA1Q09470 495 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 ZC2HC1CQ53FD0 456 aaPredicted RBP15.71■□□□□ 0.11
USP39-207ENST00000450066 PPFIBP1Q86W92 1011 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 AFAP1L1Q8TED9 768 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 SCFD2Q8WU76 684 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms