RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 LINC01553A4QN01 128 aa17.48■□□□□ 0.39
LIMS1-210ENST00000449684 PSMD10O75832 226 aa17.48■□□□□ 0.39
LIMS1-210ENST00000449684 OATP04181 439 aa17.48■□□□□ 0.39
LIMS1-210ENST00000449684 GCFC2P16383 781 aaKnown RBP17.48■□□□□ 0.39
LIMS1-210ENST00000449684 ODR4Q5SWX8 454 aa17.48■□□□□ 0.39
LIMS1-210ENST00000449684 NSUN7Q8NE18 718 aaKnown RBP17.48■□□□□ 0.39
LIMS1-210ENST00000449684 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
LIMS1-210ENST00000449684 PTPRSQ13332 1948 aa17.48■□□□□ 0.39
LIMS1-210ENST00000449684 IGSF9BQ9UPX0 1349 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 ENPP3O14638 875 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 BAG4O95429 457 aaKnown RBP17.47■□□□□ 0.39
LIMS1-210ENST00000449684 FDPSP14324 419 aaKnown RBP17.47■□□□□ 0.39
LIMS1-210ENST00000449684 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
LIMS1-210ENST00000449684 PRKCEQ02156 737 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 NFX1Q12986 1120 aaKnown RBP17.47■□□□□ 0.39
LIMS1-210ENST00000449684 MKRN4PQ13434 485 aaPredicted RBP17.47■□□□□ 0.39
LIMS1-210ENST00000449684 PPP4R3AQ6IN85 833 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 KIAA0319LQ8IZA0 1049 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 MBOAT7Q96N66 472 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 MAP7D2Q96T17 732 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 PPP1R16BQ96T49 567 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 AGO3Q9H9G7 860 aaKnown RBP17.47■□□□□ 0.39
LIMS1-210ENST00000449684 UPF2Q9HAU5 1272 aaKnown RBP17.47■□□□□ 0.39
LIMS1-210ENST00000449684 PADI3Q9ULW8 664 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 AKT3Q9Y243 479 aa17.47■□□□□ 0.39
LIMS1-210ENST00000449684 EPOPA6NHQ4 379 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 SLC37A4O43826 429 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 JAK2O60674 1132 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 RPS6KA5O75582 802 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 C22orf31O95567 290 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 IBSPP21815 317 aaPredicted RBP17.46■□□□□ 0.39
LIMS1-210ENST00000449684 ERVK-21P61565 698 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 TBC1D8BQ0IIM8 1120 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 GRB10Q13322 594 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 SAFBQ15424 915 aaKnown RBP eCLIP17.46■□□□□ 0.39
LIMS1-210ENST00000449684 C8orf34Q49A92 452 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 EFCAB12Q6NXP0 572 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 SPRED2Q7Z698 418 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 FBXO22Q8NEZ5 403 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 ETNPPLQ8TBG4 499 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 ZSCAN31Q96LW9 406 aaPredicted RBP17.46■□□□□ 0.39
LIMS1-210ENST00000449684 FAM20AQ96MK3 541 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 SAMD11Q96NU1 681 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 SUGCTQ9HAC7 445 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 SEPT9Q9UHD8 586 aaPredicted RBP17.46■□□□□ 0.39
LIMS1-210ENST00000449684 MTCH2Q9Y6C9 303 aa17.46■□□□□ 0.39
LIMS1-210ENST00000449684 KDM3AQ9Y4C1 1321 aa17.46■□□□□ 0.38
LIMS1-210ENST00000449684 ZBTB42B2RXF5 422 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 ZNF862O60290 1169 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 DKC1O60832 514 aaKnown RBP eCLIP17.45■□□□□ 0.38
LIMS1-210ENST00000449684 NR5A1Q13285 461 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 UGCGQ16739 394 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 KIZQ2M2Z5 673 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 TMEM266Q2M3C6 531 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 FIBCD1Q8N539 461 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 GDPD5Q8WTR4 605 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 SCLT1Q96NL6 688 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 C17orf80Q9BSJ5 609 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 THEGQ9P2T0 379 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 LRFN2Q9ULH4 789 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 EVPLQ92817 2033 aa17.45■□□□□ 0.38
LIMS1-210ENST00000449684 CHD7Q9P2D1 2997 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 DENND3A2RUS2 1198 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 GPR182O15218 404 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 MMP1P03956 469 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 VTNP04004 478 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 STAG3L1P0CL83 205 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 CLCN3P51790 818 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 CRYBB1P53674 252 aaPredicted RBP17.44■□□□□ 0.38
LIMS1-210ENST00000449684 MTERF2Q49AM1 385 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 XKR3Q5GH77 459 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 KRT40Q6A162 431 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 DIS3L2Q8IYB7 885 aaKnown RBP17.44■□□□□ 0.38
LIMS1-210ENST00000449684 SLFN12Q8IYM2 578 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 LRRC71Q8N4P6 559 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 OSMRQ99650 979 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 A0A0C4DFX4 3053 aa17.44■□□□□ 0.38
LIMS1-210ENST00000449684 SIP14410 1827 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 TBX3O15119 743 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 POU3F3P20264 500 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-210ENST00000449684 DNM2P50570 870 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 NLRP11P59045 1033 aaKnown RBP17.43■□□□□ 0.38
LIMS1-210ENST00000449684 PSMC5P62195 406 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 GNL2Q13823 731 aaKnown RBP17.43■□□□□ 0.38
LIMS1-210ENST00000449684 BTG3Q14201 252 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-210ENST00000449684 FAM43BQ6ZT52 329 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-210ENST00000449684 ZNF710Q8N1W2 664 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 FAM184AQ8NB25 1140 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 BANK1Q8NDB2 785 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-210ENST00000449684 CDHR5Q9HBB8 845 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 KCNMB3Q9NPA1 279 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 PRDM6Q9NQX0 595 aa17.43■□□□□ 0.38
LIMS1-210ENST00000449684 SH2B1Q9NRF2 756 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-210ENST00000449684 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-210ENST00000449684 NOC2LQ9Y3T9 749 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms