RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 KIAA1468Q9P260 1216 aa16.29■□□□□ 0.2
TNF-208ENST00000449264 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
TNF-208ENST00000449264 DBR1Q9UK59 544 aaKnown RBP16.29■□□□□ 0.2
TNF-208ENST00000449264 ZNF215Q9UL58 517 aaPredicted RBP16.29■□□□□ 0.2
TNF-208ENST00000449264 TRPC6Q9Y210 931 aa16.29■□□□□ 0.2
TNF-208ENST00000449264 PCDHA5Q9Y5H7 936 aa16.29■□□□□ 0.2
TNF-208ENST00000449264 BIN1O00499 593 aa16.28■□□□□ 0.2
TNF-208ENST00000449264 LETM1O95202 739 aaPredicted RBP16.28■□□□□ 0.2
TNF-208ENST00000449264 STBD1O95210 358 aa16.28■□□□□ 0.2
TNF-208ENST00000449264 SMC2O95347 1197 aa16.28■□□□□ 0.2
TNF-208ENST00000449264 HOXD8P13378 290 aaPredicted RBP16.28■□□□□ 0.2
TNF-208ENST00000449264 GJA9P57773 515 aa16.28■□□□□ 0.2
TNF-208ENST00000449264 PADI6Q6TGC4 694 aa16.28■□□□□ 0.2
TNF-208ENST00000449264 FAM167AQ96KS9 214 aa16.28■□□□□ 0.2
TNF-208ENST00000449264 ANKEF1Q9NU02 776 aa16.28■□□□□ 0.2
TNF-208ENST00000449264 KAT6AQ92794 2004 aa16.28■□□□□ 0.2
TNF-208ENST00000449264 MYL1P05976 194 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 IDEP14735 1019 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 SLC26A2P50443 739 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 PLCB4Q15147 1175 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 GNASQ5JWF2 1037 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 ISM2Q6H9L7 571 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 RINT1Q6NUQ1 792 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 ATP8B4Q8TF62 1192 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 C7orf25Q9BPX7 421 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 C16orf70Q9BSU1 422 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 CYP26B1Q9NR63 512 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 NRBP2Q9NSY0 501 aa16.27■□□□□ 0.2
TNF-208ENST00000449264 H3BRB1 525 aa16.27■□□□□ 0.19
TNF-208ENST00000449264 RPN1P04843 607 aaKnown RBP16.27■□□□□ 0.19
TNF-208ENST00000449264 XRCC6P12956 609 aaKnown RBP eCLIP16.27■□□□□ 0.19
TNF-208ENST00000449264 ARSHQ5FYA8 562 aa16.27■□□□□ 0.19
TNF-208ENST00000449264 SASS6Q6UVJ0 657 aa16.27■□□□□ 0.19
TNF-208ENST00000449264 MAEAQ7L5Y9 396 aa16.27■□□□□ 0.19
TNF-208ENST00000449264 BBXQ8WY36 941 aaPredicted RBP16.27■□□□□ 0.19
TNF-208ENST00000449264 REEP2Q9BRK0 252 aa16.27■□□□□ 0.19
TNF-208ENST00000449264 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.27■□□□□ 0.19
TNF-208ENST00000449264 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.19
TNF-208ENST00000449264 TUT1Q9H6E5 874 aaKnown RBP16.27■□□□□ 0.19
TNF-208ENST00000449264 MSCO60682 206 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 ADAMTS4O75173 837 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 C1orf186Q6ZWK4 172 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 ANP32EQ9BTT0 268 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 UNC93B1Q9H1C4 597 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 RNPEPQ9H4A4 650 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 ZHX3Q9H4I2 956 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 POLD4Q9HCU8 107 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 TUBE1Q9UJT0 475 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 MAN1B1Q9UKM7 699 aa16.26■□□□□ 0.19
TNF-208ENST00000449264 TBCAO75347 108 aaKnown RBP16.25■□□□□ 0.19
TNF-208ENST00000449264 F2P00734 622 aa16.25■□□□□ 0.19
TNF-208ENST00000449264 POLGP54098 1239 aaPredicted RBP16.25■□□□□ 0.19
TNF-208ENST00000449264 MTFR1Q15390 333 aa16.25■□□□□ 0.19
TNF-208ENST00000449264 FBXO46Q6PJ61 603 aaPredicted RBP16.25■□□□□ 0.19
TNF-208ENST00000449264 DNAJC19Q96DA6 116 aa16.25■□□□□ 0.19
TNF-208ENST00000449264 EXOC1Q9NV70 894 aa16.25■□□□□ 0.19
TNF-208ENST00000449264 RSPH10B2B2RC85 870 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 KLRC4O43908 158 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 ZEB2O60315 1214 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 HBP1O60381 514 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 RSPH10BP0C881 870 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 IGBP1P78318 339 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 TYRO3Q06418 890 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 GIT2Q14161 759 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 KIAA0753Q2KHM9 967 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 KMT5BQ4FZB7 885 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 NT5DC1Q5TFE4 455 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 SPATA20Q8TB22 786 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 PPP1R13LQ8WUF5 828 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 TRAPPC12Q8WVT3 735 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 KAT2BQ92831 832 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 CCDC47Q96A33 483 aaKnown RBP16.24■□□□□ 0.19
TNF-208ENST00000449264 GSDMAQ96QA5 445 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 NIFKQ9BYG3 293 aaKnown RBP16.24■□□□□ 0.19
TNF-208ENST00000449264 KCND2Q9NZV8 630 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 DGAT1O75907 488 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 CCDC192P0DO97 292 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 SARSP49591 514 aaKnown RBP16.24■□□□□ 0.19
TNF-208ENST00000449264 PURAQ00577 322 aaKnown RBP16.24■□□□□ 0.19
TNF-208ENST00000449264 MFSD10Q14728 455 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 EMC2Q15006 297 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 FAM102BQ5T8I3 360 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 CNNM4Q6P4Q7 775 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 CXCL17Q6UXB2 119 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 UNC13DQ70J99 1090 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 RNF180Q86T96 592 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 CCDC65Q8IXS2 484 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 ATP6V0A4Q9HBG4 840 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 PANK4Q9NVE7 773 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 RMND1Q9NWS8 449 aa16.24■□□□□ 0.19
TNF-208ENST00000449264 EVPLQ92817 2033 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 SCN10AQ9Y5Y9 1956 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 HIP1RO75146 1068 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 FAM13AO94988 1023 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 CCL5P13501 91 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 INSRRP14616 1297 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 GUCY2CP25092 1073 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 PSEN2P49810 448 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 SOX10P56693 466 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 ZNF445P59923 1031 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms