RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PDE4AP27815 886 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 MCM5P33992 734 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 ERVFC1P60507 584 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 TCF15Q12870 199 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 ODR4Q5SWX8 454 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 PLPP4Q5VZY2 271 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 LLGL2Q6P1M3 1020 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 PGBD1Q96JS3 809 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 CDHR5Q9HBB8 845 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 TYW1Q9NV66 732 aaKnown RBP20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 ZNF318Q5VUA4 2279 aa20.57■□□□□ 0.88
CHCHD3-203ENST00000448878 ZNF76P36508 570 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 TECP42680 631 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 VCPP55072 806 aaKnown RBP20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 APOBRQ0VD83 1088 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 DUSP6Q16828 381 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 TRMT1LQ7Z2T5 733 aaKnown RBP20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 COLGALT1Q8NBJ5 622 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 ATOH1Q92858 354 aaPredicted RBP20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 MAP4K1Q92918 833 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 TMEM87BQ96K49 555 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 CDCA3Q99618 268 aaPredicted RBP20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 ERVK-5Q9HDB9 667 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 C1orf112Q9NSG2 853 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 HCSTQ9UBK5 93 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 SLC12A7Q9Y666 1083 aa20.56■□□□□ 0.88
CHCHD3-203ENST00000448878 KDM3AQ9Y4C1 1321 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 FSD2A1L4K1 749 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 GPR182O15218 404 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 SGSM2O43147 1006 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 ATF7P17544 494 aaPredicted RBP20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 FAM160B1Q5W0V3 765 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 SLC24A5Q71RS6 500 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 VN1R2Q8NFZ6 395 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 ATP8B4Q8TF62 1192 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 SNX27Q96L92 541 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 ATP6V0A4Q9HBG4 840 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 ENTPD7Q9NQZ7 604 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 TSHZ2Q9NRE2 1034 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 RGS18Q9NS28 235 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 PUF60Q9UHX1 559 aaKnown RBP20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 ST3GAL5Q9UNP4 418 aa20.55■□□□□ 0.88
CHCHD3-203ENST00000448878 NFASCO94856 1347 aa20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 SH2B2O14492 632 aaPredicted RBP20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 HBP1O60381 514 aa20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 GFRA3O60609 400 aa20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 FGFR1P11362 822 aa20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 AVPR2P30518 371 aa20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 NAPAP54920 295 aa20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 PDE12Q6L8Q7 609 aaKnown RBP20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 CKAP2LQ8IYA6 745 aa20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 FANCBQ8NB91 859 aa20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 LRRC2Q9BYS8 371 aa20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 AGO4Q9HCK5 861 aaKnown RBP20.54■□□□□ 0.88
CHCHD3-203ENST00000448878 CA8P35219 290 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 SLC26A2P50443 739 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 ITGB3BPQ13352 177 aaPredicted RBP20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 PTPN21Q16825 1174 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 CEP55Q53EZ4 464 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 PDXDC2PQ6P474 469 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 SYNE3Q6ZMZ3 975 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 MICU3Q86XE3 530 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 KIAA0319LQ8IZA0 1049 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 TMEM40Q8WWA1 233 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 SUSD6Q92537 303 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 TCF25Q9BQ70 676 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 MTA3Q9BTC8 594 aa20.53■□□□□ 0.88
CHCHD3-203ENST00000448878 C9IYK1 514 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 H0Y858 1186 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 LAG3P18627 525 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 KIZQ2M2Z5 673 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 ANKRD54Q6NXT1 300 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 TMC7Q7Z402 723 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 METTL13Q8N6R0 699 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 MRPS27Q92552 414 aaKnown RBP20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 ASIC4Q96FT7 647 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 OSMRQ99650 979 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 ANO3Q9BYT9 981 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 IRF2BPLQ9H1B7 796 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 ZNF302Q9NR11 478 aa20.52■□□□□ 0.88
CHCHD3-203ENST00000448878 ATG7O95352 703 aa20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 LIFRP42702 1097 aa20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 KRT17Q04695 432 aa20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 ZNF484Q5JVG2 852 aa20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 WWC2Q6AWC2 1192 aa20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 SWSAP1Q6NVH7 229 aa20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 ABI1Q8IZP0 508 aa20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 CWH43Q9H720 699 aa20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 TMEM161AQ9NX61 479 aa20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 FNDC1Q4ZHG4 1894 aaPredicted RBP20.51■□□□□ 0.87
CHCHD3-203ENST00000448878 FSCN2O14926 492 aa20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 FOSP01100 380 aaPredicted RBP20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 VTNP04004 478 aa20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 ADCY7P51828 1080 aa20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 CRYBB1P53674 252 aaPredicted RBP20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 MIS18BP1Q6P0N0 1132 aa20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 RNF169Q8NCN4 708 aa20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 S1PR5Q9H228 398 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms