RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 AKAP17AQ02040 695 aaKnown RBP32.1■■■□□ 2.73
CBX4-202ENST00000448310 COL19A1Q14993 1142 aa32.1■■■□□ 2.73
CBX4-202ENST00000448310 NTRK3Q16288 839 aa32.1■■■□□ 2.73
CBX4-202ENST00000448310 PRR16Q569H4 304 aa32.1■■■□□ 2.73
CBX4-202ENST00000448310 ZNF484Q5JVG2 852 aa32.1■■■□□ 2.73
CBX4-202ENST00000448310 CKAP2LQ8IYA6 745 aa32.1■■■□□ 2.73
CBX4-202ENST00000448310 CMTR2Q8IYT2 770 aaKnown RBP32.1■■■□□ 2.73
CBX4-202ENST00000448310 PPP1R16BQ96T49 567 aa32.1■■■□□ 2.73
CBX4-202ENST00000448310 AGXT2Q9BYV1 514 aa32.1■■■□□ 2.73
CBX4-202ENST00000448310 NOC2LQ9Y3T9 749 aaKnown RBP32.1■■■□□ 2.73
CBX4-202ENST00000448310 GNA11P29992 359 aa32.09■■■□□ 2.73
CBX4-202ENST00000448310 SETQ01105 290 aaPredicted RBP32.09■■■□□ 2.73
CBX4-202ENST00000448310 GJD3Q8N144 294 aa32.09■■■□□ 2.73
CBX4-202ENST00000448310 TMEM40Q8WWA1 233 aa32.09■■■□□ 2.73
CBX4-202ENST00000448310 LRFN3Q9BTN0 628 aa32.09■■■□□ 2.73
CBX4-202ENST00000448310 SLC26A6Q9BXS9 759 aa32.09■■■□□ 2.73
CBX4-202ENST00000448310 TBC1D22BQ9NU19 505 aa32.09■■■□□ 2.73
CBX4-202ENST00000448310 MGEA5O60502 916 aa32.08■■■□□ 2.73
CBX4-202ENST00000448310 STAG3L1P0CL83 205 aa32.08■■■□□ 2.73
CBX4-202ENST00000448310 CCT2P78371 535 aaKnown RBP32.08■■■□□ 2.73
CBX4-202ENST00000448310 MCTP2Q6DN12 878 aa32.08■■■□□ 2.73
CBX4-202ENST00000448310 ZNF746Q6NUN9 644 aaPredicted RBP32.08■■■□□ 2.73
CBX4-202ENST00000448310 FBXL16Q8N461 479 aa32.08■■■□□ 2.73
CBX4-202ENST00000448310 CCDC136Q96JN2 1154 aa32.08■■■□□ 2.73
CBX4-202ENST00000448310 NCOA5Q9HCD5 579 aaKnown RBP32.08■■■□□ 2.73
CBX4-202ENST00000448310 ERVK-5Q9HDB9 667 aa32.08■■■□□ 2.73
CBX4-202ENST00000448310 VPS54Q9P1Q0 977 aa32.08■■■□□ 2.73
CBX4-202ENST00000448310 FNDC1Q4ZHG4 1894 aaPredicted RBP32.08■■■□□ 2.73
CBX4-202ENST00000448310 RPS6KA5O75582 802 aa32.07■■■□□ 2.72
CBX4-202ENST00000448310 SSTR3P32745 418 aaPredicted RBP32.07■■■□□ 2.72
CBX4-202ENST00000448310 HYAL1Q12794 435 aa32.07■■■□□ 2.72
CBX4-202ENST00000448310 PLVAPQ9BX97 442 aa32.07■■■□□ 2.72
CBX4-202ENST00000448310 RNF26Q9BY78 433 aaPredicted RBP32.07■■■□□ 2.72
CBX4-202ENST00000448310 LRFN2Q9ULH4 789 aa32.07■■■□□ 2.72
CBX4-202ENST00000448310 PLAGL2Q9UPG8 496 aa32.07■■■□□ 2.72
CBX4-202ENST00000448310 MAFBQ9Y5Q3 323 aaPredicted RBP32.07■■■□□ 2.72
CBX4-202ENST00000448310 PLXNA4Q9HCM2 1894 aa32.06■■■□□ 2.72
CBX4-202ENST00000448310 FAM86C2PA6NEL3 165 aa32.06■■■□□ 2.72
CBX4-202ENST00000448310 C22orf31O95567 290 aa32.06■■■□□ 2.72
CBX4-202ENST00000448310 MMP1P03956 469 aa32.06■■■□□ 2.72
CBX4-202ENST00000448310 GTF2F1P35269 517 aaKnown RBP eCLIP32.06■■■□□ 2.727e-10■■■■■ 142.2
CBX4-202ENST00000448310 LTBRP36941 435 aa32.06■■■□□ 2.72
CBX4-202ENST00000448310 CAMK1Q14012 370 aa32.06■■■□□ 2.72
CBX4-202ENST00000448310 PUS10Q3MIT2 529 aaKnown RBP32.06■■■□□ 2.72
CBX4-202ENST00000448310 BBXQ8WY36 941 aaPredicted RBP32.06■■■□□ 2.72
CBX4-202ENST00000448310 GABBR1Q9UBS5 961 aa32.06■■■□□ 2.72
CBX4-202ENST00000448310 TCEAL9Q9UHQ7 104 aa32.06■■■□□ 2.72
CBX4-202ENST00000448310 PSMA5P28066 241 aa32.05■■■□□ 2.72
CBX4-202ENST00000448310 PDIA3P30101 505 aaKnown RBP32.05■■■□□ 2.72
CBX4-202ENST00000448310 KIZQ2M2Z5 673 aa32.05■■■□□ 2.72
CBX4-202ENST00000448310 TMEM31Q5JXX7 168 aa32.05■■■□□ 2.72
CBX4-202ENST00000448310 SMAP1Q8IYB5 467 aaPredicted RBP32.05■■■□□ 2.72
CBX4-202ENST00000448310 LENG9Q96B70 501 aa32.05■■■□□ 2.72
CBX4-202ENST00000448310 C11orf16Q9NQ32 467 aa32.05■■■□□ 2.72
CBX4-202ENST00000448310 PCDHA10Q9Y5I2 948 aa32.05■■■□□ 2.72
CBX4-202ENST00000448310 REC8O95072 547 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 ITGB1P05556 798 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 PSAPP07602 524 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 IFNAR1P17181 557 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 DNAJB1P25685 340 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 CIITAP33076 1130 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 SARSP49591 514 aaKnown RBP32.04■■■□□ 2.72
CBX4-202ENST00000448310 DLX2Q07687 328 aaPredicted RBP32.04■■■□□ 2.72
CBX4-202ENST00000448310 CLUL1Q15846 466 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 METTL13Q8N6R0 699 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 CCDC148Q8NFR7 591 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 BICD2Q8TD16 824 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 P2RX5Q93086 422 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 OSMRQ99650 979 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 IGFLR1Q9H665 355 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 ST3GAL5Q9UNP4 418 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 SAMM50Q9Y512 469 aa32.04■■■□□ 2.72
CBX4-202ENST00000448310 PI4K2BG5E9Z4 385 aa32.03■■■□□ 2.72
CBX4-202ENST00000448310 EDIL3O43854 480 aa32.03■■■□□ 2.72
CBX4-202ENST00000448310 VTNP04004 478 aa32.03■■■□□ 2.72
CBX4-202ENST00000448310 CTC1Q2NKJ3 1217 aa32.03■■■□□ 2.72
CBX4-202ENST00000448310 KLHL23Q8NBE8 558 aa32.03■■■□□ 2.72
CBX4-202ENST00000448310 ADAM2Q99965 735 aa32.03■■■□□ 2.72
CBX4-202ENST00000448310 PCDHB7Q9Y5E2 793 aa32.03■■■□□ 2.72
CBX4-202ENST00000448310 DENND3A2RUS2 1198 aa32.02■■■□□ 2.72
CBX4-202ENST00000448310 NCK2O43639 380 aa32.02■■■□□ 2.72
CBX4-202ENST00000448310 SPPL3Q8TCT6 385 aa32.02■■■□□ 2.72
CBX4-202ENST00000448310 LINC01565O15544 149 aa32.01■■■□□ 2.71
CBX4-202ENST00000448310 CLCN3P51790 818 aa32.01■■■□□ 2.71
CBX4-202ENST00000448310 TOB2Q14106 344 aaPredicted RBP32.01■■■□□ 2.71
CBX4-202ENST00000448310 FAM228AQ86W67 206 aa32.01■■■□□ 2.71
CBX4-202ENST00000448310 RGS18Q9NS28 235 aa32.01■■■□□ 2.71
CBX4-202ENST00000448310 MSH4O15457 936 aa32■■■□□ 2.71
CBX4-202ENST00000448310 IRS1P35568 1242 aa32■■■□□ 2.71
CBX4-202ENST00000448310 CRYBB1P53674 252 aaPredicted RBP32■■■□□ 2.71
CBX4-202ENST00000448310 EVCP57679 992 aa32■■■□□ 2.71
CBX4-202ENST00000448310 GJA10Q969M2 543 aa32■■■□□ 2.71
CBX4-202ENST00000448310 GPR182O15218 404 aa31.99■■■□□ 2.71
CBX4-202ENST00000448310 TBX10O75333 385 aa31.99■■■□□ 2.71
CBX4-202ENST00000448310 GPR32O75388 356 aa31.99■■■□□ 2.71
CBX4-202ENST00000448310 NLRP5P59047 1200 aa31.99■■■□□ 2.71
CBX4-202ENST00000448310 NAALADL2Q58DX5 795 aa31.99■■■□□ 2.71
CBX4-202ENST00000448310 FAM102BQ5T8I3 360 aa31.99■■■□□ 2.71
CBX4-202ENST00000448310 RUFY3Q7L099 469 aa31.99■■■□□ 2.71
CBX4-202ENST00000448310 ADGRD2Q7Z7M1 963 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms