RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 KCNQ5Q9NR82 932 aa14.09□□□□□ -0.15
SHC1-210ENST00000448116 ZNF219Q9P2Y4 722 aaPredicted RBP14.09□□□□□ -0.15
SHC1-210ENST00000448116 AMACRQ9UHK6 382 aa14.09□□□□□ -0.15
SHC1-210ENST00000448116 FAM86B1E9PN63 330 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 KIAA0754O94854 1291 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 FAM86B2P0C5J1 330 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 SPATA31C1P0DKV0 1188 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 HOXA7P31268 230 aaPredicted RBP14.08□□□□□ -0.16
SHC1-210ENST00000448116 HOXD13P35453 343 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 RNF187Q5TA31 235 aaPredicted RBP14.08□□□□□ -0.16
SHC1-210ENST00000448116 FOXR2Q6PJQ5 311 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 FRMD5Q7Z6J6 570 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 TPH2Q8IWU9 490 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 PLIN4Q96Q06 1357 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 RPL13P26373 211 aaKnown RBP14.08□□□□□ -0.16
SHC1-210ENST00000448116 PLS1Q14651 629 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 MYCT1Q8N699 235 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 RDH13Q8NBN7 331 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 AMNQ9BXJ7 453 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 DBNDD1Q9H9R9 158 aa14.08□□□□□ -0.16
SHC1-210ENST00000448116 NOC2LQ9Y3T9 749 aaKnown RBP14.08□□□□□ -0.16
SHC1-210ENST00000448116 H0YHG0 523 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 PGRMC1O00264 195 aaKnown RBP14.07□□□□□ -0.16
SHC1-210ENST00000448116 NMT1P30419 496 aaKnown RBP14.07□□□□□ -0.16
SHC1-210ENST00000448116 LSP1P33241 339 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 CTNNA1P35221 906 aaKnown RBP14.07□□□□□ -0.16
SHC1-210ENST00000448116 UBXN2AP68543 259 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 SKOR1P84550 965 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 ZC2HC1CQ53FD0 456 aaPredicted RBP14.07□□□□□ -0.16
SHC1-210ENST00000448116 FBXO11Q86XK2 927 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 SYT2Q8N9I0 419 aaPredicted RBP14.07□□□□□ -0.16
SHC1-210ENST00000448116 BZW2Q9Y6E2 419 aaKnown RBP14.07□□□□□ -0.16
SHC1-210ENST00000448116 PITPNM2Q9BZ72 1349 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 FAM13AO94988 1023 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 RPA1P27694 616 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 ICA1Q05084 483 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 APOBEC3HQ6NTF7 200 aaKnown RBP14.07□□□□□ -0.16
SHC1-210ENST00000448116 OTUD6BQ8N6M0 293 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 TPCN2Q8NHX9 752 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 PBKQ96KB5 322 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 ATP6V1G3Q96LB4 118 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 CELF4Q9BZC1 486 aaKnown RBP14.07□□□□□ -0.16
SHC1-210ENST00000448116 GLT8D2Q9H1C3 349 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 BCS1LQ9Y276 419 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 RABGAP1Q9Y3P9 1069 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 DDTLA6NHG4 134 aaPredicted RBP14.07□□□□□ -0.16
SHC1-210ENST00000448116 E7EVH7 732 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 F5H6K3 240 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 ZBTB39O15060 712 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 DAPK3O43293 454 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 CYP2J2P51589 502 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 KLRC3Q07444 240 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 DDR1Q08345 913 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 CCDC17Q96LX7 622 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 DNAJC18Q9H819 358 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 TRAF3IP3Q9Y228 551 aa14.07□□□□□ -0.16
SHC1-210ENST00000448116 PDXKO00764 312 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 HSD17B3P37058 310 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 ARHGAP44Q17R89 818 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 GLYCTKQ8IVS8 523 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 ETNPPLQ8TBG4 499 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 GCOM1H8Y6P7 765 aaPredicted RBP14.06□□□□□ -0.16
SHC1-210ENST00000448116 EML1O00423 815 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 MYZAPP0CAP1 466 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 EPHA7Q15375 998 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 FBXW10Q5XX13 1052 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 SLC35C1Q96A29 364 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 ISCUQ9H1K1 167 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 OSGEPQ9NPF4 335 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 PLCB1Q9NQ66 1216 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 TYW1Q9NV66 732 aaKnown RBP14.06□□□□□ -0.16
SHC1-210ENST00000448116 AHDC1Q5TGY3 1603 aaPredicted RBP14.06□□□□□ -0.16
SHC1-210ENST00000448116 DDX3XO00571 662 aaKnown RBP eCLIP14.06□□□□□ -0.167e-8■■□□□ 13.1
SHC1-210ENST00000448116 BACH1O14867 736 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 MSH4O15457 936 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 TTI1O43156 1089 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 POLD1P28340 1107 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 STAT1P42224 750 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 CRKP46108 304 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 GALCP54803 685 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 SPIRE1Q08AE8 756 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 C10orf76Q5T2E6 689 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 TRMT1LQ7Z2T5 733 aaKnown RBP14.06□□□□□ -0.16
SHC1-210ENST00000448116 FAM186BQ8IYM0 893 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 ZNF513Q8N8E2 541 aaPredicted RBP14.06□□□□□ -0.16
SHC1-210ENST00000448116 LMBR1Q8WVP7 490 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 EIF2AK1Q9BQI3 630 aaKnown RBP14.06□□□□□ -0.16
SHC1-210ENST00000448116 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.06□□□□□ -0.168e-8■■□□□ 11.8
SHC1-210ENST00000448116 NEUROG2Q9H2A3 272 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 METTL14Q9HCE5 456 aaKnown RBP14.06□□□□□ -0.16
SHC1-210ENST00000448116 CAPN7Q9Y6W3 813 aa14.06□□□□□ -0.16
SHC1-210ENST00000448116 FRMD3A2A2Y4 597 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 COPB2P35606 906 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 FLT3P36888 993 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 COG2Q14746 738 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 KDM7AQ6ZMT4 941 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 B4GALNT4Q76KP1 1039 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 MAEAQ7L5Y9 396 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 FAM212AQ96EL1 285 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms