RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 FAM20AQ96MK3 541 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 TMEM106CQ9BVX2 250 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 GOLPH3LQ9H4A5 285 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 SRRDQ9UH36 339 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 ODF2LQ9ULJ1 636 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 NOD1Q9Y239 953 aa6.54□□□□□ -1.36
PROM1-201ENST00000447510 SOWAHBA6NEL2 793 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 STAM2O75886 525 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 MYL3P08590 195 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 ARP10275 920 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CDC25AP30304 524 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 GBP2P32456 591 aaPredicted RBP6.53□□□□□ -1.36
PROM1-201ENST00000447510 SYKP43405 635 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 TMEM132AQ24JP5 1023 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CABP7Q86V35 215 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 FAM133AQ8N9E0 248 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 GPRASP2Q96D09 838 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 MAML3Q96JK9 1138 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 RUFY1Q96T51 708 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 GBP3Q9H0R5 595 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 POLR3EQ9NVU0 708 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 TRPC6Q9Y210 931 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CTAGE15A4D2H0 777 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 MAFGO15525 162 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 GH1P01241 217 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CTAGE8P0CG41 777 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 IDEP14735 1019 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 GRK4P32298 578 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 GCKP35557 465 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CCL14Q16627 93 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 FAM160B1Q5W0V3 765 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 MIS18BP1Q6P0N0 1132 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CTAGE6Q86UF2 777 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CTAGE4Q8IX94 777 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CAGE1Q8TC20 777 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 FAM71BQ8TC56 605 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 PNKPQ96T60 521 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 PLCD4Q9BRC7 762 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 VTA1Q9NP79 307 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 MED4Q9NPJ6 270 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 JADE2Q9NQC1 790 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 SAGE1Q9NXZ1 904 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 SLC9A2Q9UBY0 812 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 GABRQQ9UN88 632 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 NDUFAB1O14561 156 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CBFA2T2O43439 604 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 TUBB4AP04350 444 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 PSAPP07602 524 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 PRKAR2AP13861 404 aaKnown RBP6.53□□□□□ -1.36
PROM1-201ENST00000447510 ADCYAP1R1P41586 468 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 VSNL1P62760 191 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 KRT76Q01546 638 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 FAM160A1Q05DH4 1040 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 GRB14Q14449 540 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 PPP4R3AQ6IN85 833 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 TOGARAM2Q6ZUX3 1019 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 SUGP1Q8IWZ8 645 aaKnown RBP6.53□□□□□ -1.36
PROM1-201ENST00000447510 LINC00301Q8NCQ3 95 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 FAM76AQ8TAV0 307 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 SGSM3Q96HU1 749 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 CAPZA3Q96KX2 299 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 JPH1Q9HDC5 661 aaPredicted RBP6.53□□□□□ -1.36
PROM1-201ENST00000447510 HMX1Q9NP08 348 aaPredicted RBP6.53□□□□□ -1.36
PROM1-201ENST00000447510 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.53□□□□□ -1.36
PROM1-201ENST00000447510 FOCADQ5VW36 1801 aa6.53□□□□□ -1.36
PROM1-201ENST00000447510 POTEMA6NI47 508 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 FAM86B1E9PN63 330 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 PES1O00541 588 aaKnown RBP6.52□□□□□ -1.37
PROM1-201ENST00000447510 SLC37A4O43826 429 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 GNRH1P01148 92 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 FAM86B2P0C5J1 330 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 MARK3P27448 753 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 AFMP43652 599 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 PRMT2P55345 433 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 IGBP1P78318 339 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 SF3A3Q12874 501 aaKnown RBP eCLIP6.52□□□□□ -1.37
PROM1-201ENST00000447510 ORC2Q13416 577 aaPredicted RBP6.52□□□□□ -1.37
PROM1-201ENST00000447510 LY6KQ17RY6 165 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 GNASQ5JWF2 1037 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 PDXDC2PQ6P474 469 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 TRIM65Q6PJ69 517 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 NPLOC4Q8TAT6 608 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 ATP6V0A1Q93050 837 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 PYM1Q9BRP8 204 aaKnown RBP6.52□□□□□ -1.37
PROM1-201ENST00000447510 RNF208Q9H0X6 261 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 CSRNP2Q9H175 543 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 TMEM60Q9H2L4 133 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 DISC1Q9NRI5 854 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 FANCLQ9NW38 375 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 PCDHA7Q9UN72 937 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 DNM3Q9UQ16 869 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 STK24Q9Y6E0 443 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 ARHGEF35A5YM69 484 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 MSH4O15457 936 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 HMGCRP04035 888 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 AKR1A1P14550 325 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 ELF1P32519 619 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 LONP1P36776 959 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms