RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 IL23AQ9NPF7 189 aa24.61■■□□□ 1.53
APOE-204ENST00000446996 SPATA31C1P0DKV0 1188 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 CSF2RAP15509 400 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 CYP4A11Q02928 519 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 ZNF618Q5T7W0 954 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 ATL3Q6DD88 541 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 TRAF7Q6Q0C0 670 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 CHRDL2Q6WN34 429 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 RUFY4Q6ZNE9 571 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 KCTD17Q8N5Z5 321 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 ZNF396Q96N95 335 aaPredicted RBP24.6■■□□□ 1.53
APOE-204ENST00000446996 JPH2Q9BR39 696 aaPredicted RBP24.6■■□□□ 1.53
APOE-204ENST00000446996 UBE2OQ9C0C9 1292 aaKnown RBP24.6■■□□□ 1.53
APOE-204ENST00000446996 ANKEF1Q9NU02 776 aa24.6■■□□□ 1.53
APOE-204ENST00000446996 WRAP73Q9P2S5 460 aaPredicted RBP24.6■■□□□ 1.53
APOE-204ENST00000446996 SEPT9Q9UHD8 586 aaPredicted RBP24.6■■□□□ 1.53
APOE-204ENST00000446996 RSPH10B2B2RC85 870 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 SLC26A4O43511 780 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 BRD1O95696 1058 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 RSPH10BP0C881 870 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 YWHABP31946 246 aaKnown RBP24.59■■□□□ 1.53
APOE-204ENST00000446996 PTPAQ15257 358 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 IL17AQ16552 155 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 CATSPER3Q86XQ3 398 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 LINC01465Q8N7H1 131 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 AK8Q96MA6 479 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 CYP26B1Q9NR63 512 aa24.59■■□□□ 1.53
APOE-204ENST00000446996 SCN5AQ14524 2016 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 IGKV6-21A0A0C4DH24 114 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 CXCL10P02778 98 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 TMOD1P28289 359 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 TBC1D8BQ0IIM8 1120 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 IER5Q5VY09 327 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 KRT79Q5XKE5 535 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 FAM173BQ6P4H8 233 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 PSRC1Q6PGN9 363 aaPredicted RBP24.58■■□□□ 1.53
APOE-204ENST00000446996 TRMT1LQ7Z2T5 733 aaKnown RBP24.58■■□□□ 1.53
APOE-204ENST00000446996 DNAJB3Q8WWF6 145 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 SCLYQ96I15 445 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 NACC1Q96RE7 527 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 CLIC4Q9Y696 253 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 SQORQ9Y6N5 450 aa24.58■■□□□ 1.53
APOE-204ENST00000446996 MAFO75444 373 aaPredicted RBP24.57■■□□□ 1.52
APOE-204ENST00000446996 MED24O75448 989 aa24.57■■□□□ 1.52
APOE-204ENST00000446996 NASPP49321 788 aaPredicted RBP24.57■■□□□ 1.52
APOE-204ENST00000446996 MTERF2Q49AM1 385 aa24.57■■□□□ 1.52
APOE-204ENST00000446996 FAM43BQ6ZT52 329 aaPredicted RBP24.57■■□□□ 1.52
APOE-204ENST00000446996 KIAA0319LQ8IZA0 1049 aa24.57■■□□□ 1.52
APOE-204ENST00000446996 KDM3AQ9Y4C1 1321 aa24.57■■□□□ 1.52
APOE-204ENST00000446996 TRIOBPQ9H2D6 2365 aa24.56■■□□□ 1.52
APOE-204ENST00000446996 GAS2O43903 313 aaKnown RBP24.56■■□□□ 1.52
APOE-204ENST00000446996 LONP1P36776 959 aaKnown RBP24.56■■□□□ 1.52
APOE-204ENST00000446996 RFC5P40937 340 aa24.56■■□□□ 1.52
APOE-204ENST00000446996 CDC42EP1Q00587 391 aa24.56■■□□□ 1.52
APOE-204ENST00000446996 MGAT3Q09327 533 aa24.56■■□□□ 1.52
APOE-204ENST00000446996 SLC39A14Q15043 492 aa24.56■■□□□ 1.52
APOE-204ENST00000446996 HABP4Q5JVS0 413 aaKnown RBP24.56■■□□□ 1.52
APOE-204ENST00000446996 EFCAB12Q6NXP0 572 aa24.56■■□□□ 1.52
APOE-204ENST00000446996 CEP170P1Q96L14 293 aa24.56■■□□□ 1.52
APOE-204ENST00000446996 USP28Q96RU2 1077 aa24.56■■□□□ 1.52
APOE-204ENST00000446996 DBR1Q9UK59 544 aaKnown RBP24.56■■□□□ 1.52
APOE-204ENST00000446996 COLQQ9Y215 455 aaPredicted RBP24.56■■□□□ 1.52
APOE-204ENST00000446996 LOXHD1Q8IVV2 1947 aa24.56■■□□□ 1.52
APOE-204ENST00000446996 VWA3AA6NCI4 1184 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 M0QZ92 97 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 CCT6AP40227 531 aaKnown RBP24.55■■□□□ 1.52
APOE-204ENST00000446996 MRPS6P82932 125 aaKnown RBP24.55■■□□□ 1.52
APOE-204ENST00000446996 PKP1Q13835 747 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 GPNMBQ14956 572 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 TMEM240Q5SV17 173 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 HYIQ5T013 277 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 C16orf59Q7L2K0 433 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 TDHQ8IZJ6 230 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 SNX29Q8TEQ0 813 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 VWCEQ96DN2 955 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 FAM49AQ9H0Q0 323 aaPredicted RBP24.55■■□□□ 1.52
APOE-204ENST00000446996 DHX33Q9H6R0 707 aaKnown RBP24.55■■□□□ 1.52
APOE-204ENST00000446996 SRPRBQ9Y5M8 271 aaKnown RBP24.55■■□□□ 1.52
APOE-204ENST00000446996 ARID2Q68CP9 1835 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 TET1Q8NFU7 2136 aa24.55■■□□□ 1.52
APOE-204ENST00000446996 FGBP02675 491 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 CHRNA1P02708 482 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 DNM2P50570 870 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 EPHB4P54760 987 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 NPEPPSP55786 919 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 XKR9Q5GH70 373 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 METTL13Q8N6R0 699 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 ZBTB10Q96DT7 871 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 MAP7D2Q96T17 732 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 TRPV2Q9Y5S1 764 aa24.54■■□□□ 1.52
APOE-204ENST00000446996 TMEM150BA6NC51 233 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 NBNO60934 754 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 YEATS4O95619 227 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 RARRES1P49788 294 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 MBTPS1Q14703 1052 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 PLA2G4FQ68DD2 849 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 USP38Q8NB14 1042 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 LINC00301Q8NCQ3 95 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 SLC7A3Q8WY07 619 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms