RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 IFFO1Q0D2I5 559 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 ASPRV1Q53RT3 343 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 SAMD1Q6SPF0 538 aaPredicted RBP15.5■□□□□ 0.07
ERCC3-203ENST00000445889 TAS2R14Q9NYV8 317 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 TMOD4Q9NZQ9 345 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 IGSF9BQ9UPX0 1349 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 BUB1BO60566 1050 aaPredicted RBP15.49■□□□□ 0.07
ERCC3-203ENST00000445889 GNA14O95837 355 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 TTLL1O95922 423 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 H2AFZP0C0S5 128 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 CLK2P49760 499 aaKnown RBP15.49■□□□□ 0.07
ERCC3-203ENST00000445889 ARHGAP44Q17R89 818 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 KNOP1Q1ED39 458 aaKnown RBP15.49■□□□□ 0.07
ERCC3-203ENST00000445889 H2AFVQ71UI9 128 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 CEP57Q86XR8 500 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 PALB2Q86YC2 1186 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 CNBD1Q8NA66 436 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 RPGRQ92834 1020 aaKnown RBP15.49■□□□□ 0.07
ERCC3-203ENST00000445889 NT5C3AQ9H0P0 336 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 VCPKMTQ9H867 229 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 ERVK-5Q9HDB9 667 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 SLC12A6Q9UHW9 1150 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 CCNL1Q9UK58 526 aaPredicted RBP15.49■□□□□ 0.07
ERCC3-203ENST00000445889 PNMA2Q9UL42 364 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 PCDHAC2Q9Y5I4 1007 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 MYH4Q9Y623 1939 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 OPLAHO14841 1288 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 ZBTB5O15062 677 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 QRICH1Q2TAL8 776 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 SPATS2Q86XZ4 545 aaKnown RBP15.49■□□□□ 0.07
ERCC3-203ENST00000445889 RUSC1Q9BVN2 902 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 SLC40A1Q9NP59 571 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 HAUS2Q9NVX0 235 aa15.49■□□□□ 0.07
ERCC3-203ENST00000445889 TMEM110-MUSTN1A8MSY1 372 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 CHMP2AO43633 222 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 CAND2O75155 1236 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 NMT1P30419 496 aaKnown RBP15.48■□□□□ 0.07
ERCC3-203ENST00000445889 SLCO1A2P46721 670 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 GGT7Q9UJ14 662 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 SNX24Q9Y343 169 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 TRIM49P0CI25 452 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 TRIM49CP0CI26 452 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 CDR1P51861 262 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 PLTPP55058 493 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 NFIAQ12857 509 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 CPLX4Q7Z7G2 160 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 NT5DC3Q86UY8 548 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 ARFGAP2Q8N6H7 521 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 LNX1Q8TBB1 728 aaPredicted RBP15.48■□□□□ 0.07
ERCC3-203ENST00000445889 SLC35G2Q8TBE7 412 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 LRRC45Q96CN5 670 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 ANO3Q9BYT9 981 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 CXorf56Q9H5V9 222 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 GGA1Q9UJY5 639 aa15.48■□□□□ 0.07
ERCC3-203ENST00000445889 COL22A1Q8NFW1 1626 aaPredicted RBP15.48■□□□□ 0.07
ERCC3-203ENST00000445889 SPDYE3A6NKU9 549 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 EVI5O60447 810 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 FLOT1O75955 427 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 NR3C1P04150 777 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 RDXP35241 583 aaKnown RBP15.47■□□□□ 0.07
ERCC3-203ENST00000445889 PPP2R2AP63151 447 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 IKQ13123 557 aaPredicted RBP15.47■□□□□ 0.07
ERCC3-203ENST00000445889 TMC3Q7Z5M5 1100 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 ACTRT1Q8TDG2 376 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 ZKSCAN4Q969J2 545 aaPredicted RBP15.47■□□□□ 0.07
ERCC3-203ENST00000445889 ARHGEF26Q96DR7 871 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 SEC16BQ96JE7 1060 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 PBKQ96KB5 322 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 SCLT1Q96NL6 688 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 SIX2Q9NPC8 291 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 UTRNP46939 3433 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 RREB1Q92766 1687 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 FAM86B1E9PN63 330 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 FAM86B2P0C5J1 330 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 SPATA31C1P0DKV0 1188 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 UBXN2AP68543 259 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 CTTNQ14247 550 aaKnown RBP15.47■□□□□ 0.07
ERCC3-203ENST00000445889 E2F5Q15329 346 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 EPHA7Q15375 998 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 DCAF12L1Q5VU92 463 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 MAEAQ7L5Y9 396 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 SLC35C1Q96A29 364 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 SELENOSQ9BQE4 189 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 CDCA7Q9BWT1 371 aaPredicted RBP15.47■□□□□ 0.07
ERCC3-203ENST00000445889 MTFR1LQ9H019 292 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 USP40Q9NVE5 1235 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 SERPINB13Q9UIV8 391 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 DNM3Q9UQ16 869 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 TRAPPC3O43617 180 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 ZBTB48P10074 688 aaPredicted RBP15.47■□□□□ 0.07
ERCC3-203ENST00000445889 CUL1Q13616 776 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 DOK7Q18PE1 504 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 EMC10Q5UCC4 262 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 C6orf89Q6UWU4 347 aa15.47■□□□□ 0.07
ERCC3-203ENST00000445889 YTHDF3Q7Z739 585 aaKnown RBP15.47■□□□□ 0.07
ERCC3-203ENST00000445889 ECM2O94769 699 aaPredicted RBP15.46■□□□□ 0.07
ERCC3-203ENST00000445889 SNHG28P0DPA3 235 aa15.46■□□□□ 0.07
ERCC3-203ENST00000445889 SMARCA1P28370 1054 aa15.46■□□□□ 0.07
ERCC3-203ENST00000445889 CYP2J2P51589 502 aa15.46■□□□□ 0.07
ERCC3-203ENST00000445889 MARSP56192 900 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms