RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 NUCKS1Q9H1E3 243 aaKnown RBP15.04■□□□□ -0
RBM39-216ENST00000444878 METTL14Q9HCE5 456 aaKnown RBP15.04■□□□□ -0
RBM39-216ENST00000444878 CDC23Q9UJX2 597 aa15.04■□□□□ -0
RBM39-216ENST00000444878 TFR2Q9UP52 801 aa15.04■□□□□ -0
RBM39-216ENST00000444878 AKR1B10O60218 316 aa15.04■□□□□ -0
RBM39-216ENST00000444878 AKAP3O75969 853 aa15.04■□□□□ -0
RBM39-216ENST00000444878 DSG3P32926 999 aa15.04■□□□□ -0
RBM39-216ENST00000444878 POLR2FP61218 127 aaKnown RBP15.04■□□□□ -0
RBM39-216ENST00000444878 BAATQ14032 418 aaPredicted RBP15.04■□□□□ -0
RBM39-216ENST00000444878 COG2Q14746 738 aa15.04■□□□□ -0
RBM39-216ENST00000444878 SUPT20HL1Q3ZLR7 823 aa15.04■□□□□ -0
RBM39-216ENST00000444878 ZC2HC1CQ53FD0 456 aaPredicted RBP15.04■□□□□ -0
RBM39-216ENST00000444878 ODR4Q5SWX8 454 aa15.04■□□□□ -0
RBM39-216ENST00000444878 ZNF720Q7Z2F6 126 aa15.04■□□□□ -0
RBM39-216ENST00000444878 EHBP1Q8NDI1 1231 aa15.04■□□□□ -0
RBM39-216ENST00000444878 TMOD4Q9NZQ9 345 aa15.04■□□□□ -0
RBM39-216ENST00000444878 TESPA1A2RU30 521 aaPredicted RBP15.03■□□□□ -0
RBM39-216ENST00000444878 SLC16A3O15427 465 aaKnown RBP15.03■□□□□ -0
RBM39-216ENST00000444878 TGFB1I1O43294 461 aa15.03■□□□□ -0
RBM39-216ENST00000444878 NOL4O94818 638 aa15.03■□□□□ -0
RBM39-216ENST00000444878 AFPP02771 609 aaKnown RBP15.03■□□□□ -0
RBM39-216ENST00000444878 EIF4A3P38919 411 aaKnown RBP15.03■□□□□ -0
RBM39-216ENST00000444878 QARSP47897 775 aaKnown RBP15.03■□□□□ -0
RBM39-216ENST00000444878 KIF11P52732 1056 aa15.03■□□□□ -0
RBM39-216ENST00000444878 HIRAP54198 1017 aaPredicted RBP15.03■□□□□ -0
RBM39-216ENST00000444878 OAZ1P54368 228 aa15.03■□□□□ -0
RBM39-216ENST00000444878 KIF5AQ12840 1032 aa15.03■□□□□ -0
RBM39-216ENST00000444878 FBXO38Q6PIJ6 1188 aa15.03■□□□□ -0
RBM39-216ENST00000444878 PADI6Q6TGC4 694 aa15.03■□□□□ -0
RBM39-216ENST00000444878 PURBQ96QR8 312 aaKnown RBP15.03■□□□□ -0
RBM39-216ENST00000444878 TCEAL9Q9UHQ7 104 aa15.03■□□□□ -0
RBM39-216ENST00000444878 UBE4BO95155 1302 aa15.03■□□□□ -0
RBM39-216ENST00000444878 HIP1RO75146 1068 aa15.02■□□□□ -0
RBM39-216ENST00000444878 VAV2P52735 878 aa15.02■□□□□ -0
RBM39-216ENST00000444878 PRKG1Q13976 671 aa15.02■□□□□ -0
RBM39-216ENST00000444878 DCAF17Q5H9S7 520 aaPredicted RBP15.02■□□□□ -0
RBM39-216ENST00000444878 SFMBT2Q5VUG0 894 aa15.02■□□□□ -0
RBM39-216ENST00000444878 REPS2Q8NFH8 660 aa15.02■□□□□ -0
RBM39-216ENST00000444878 FIZ1Q96SL8 496 aa15.02■□□□□ -0
RBM39-216ENST00000444878 CCDC94Q9BW85 323 aaPredicted RBP15.02■□□□□ -0
RBM39-216ENST00000444878 TSGA10Q9BZW7 698 aa15.02■□□□□ -0
RBM39-216ENST00000444878 LACRTQ9GZZ8 138 aa15.02■□□□□ -0
RBM39-216ENST00000444878 PCDHB13Q9Y5F0 798 aa15.02■□□□□ -0
RBM39-216ENST00000444878 RCCD1A6NED2 376 aa15.02□□□□□ -0.01
RBM39-216ENST00000444878 CASP4P49662 377 aa15.02□□□□□ -0.01
RBM39-216ENST00000444878 SLC9C1Q4G0N8 1177 aa15.02□□□□□ -0.01
RBM39-216ENST00000444878 TDRD12Q587J7 1177 aaKnown RBP15.02□□□□□ -0.01
RBM39-216ENST00000444878 TCERG1LQ5VWI1 586 aa15.02□□□□□ -0.01
RBM39-216ENST00000444878 HS2ST1Q7LGA3 356 aa15.02□□□□□ -0.01
RBM39-216ENST00000444878 GPIHBP1Q8IV16 184 aa15.02□□□□□ -0.01
RBM39-216ENST00000444878 CEP112Q8N8E3 955 aa15.02□□□□□ -0.01
RBM39-216ENST00000444878 SYN2Q92777 582 aaPredicted RBP15.02□□□□□ -0.01
RBM39-216ENST00000444878 CCDC43Q96MW1 224 aaKnown RBP15.02□□□□□ -0.01
RBM39-216ENST00000444878 IFIH1Q9BYX4 1025 aaKnown RBP15.02□□□□□ -0.01
RBM39-216ENST00000444878 ZNF214Q9UL59 606 aaPredicted RBP15.02□□□□□ -0.01
RBM39-216ENST00000444878 ADAMTS5Q9UNA0 930 aa15.02□□□□□ -0.01
RBM39-216ENST00000444878 ZMYM2Q9UBW7 1377 aa15.02□□□□□ -0.01
RBM39-216ENST00000444878 DOCK5Q9H7D0 1870 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 SSC5DA1L4H1 1573 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 ZNF263O14978 683 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 PPP1R12BO60237 982 aaPredicted RBP15.01□□□□□ -0.01
RBM39-216ENST00000444878 USO1O60763 962 aaKnown RBP15.01□□□□□ -0.01
RBM39-216ENST00000444878 ATP9AO75110 1047 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 CCND2P30279 289 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 NOL9Q5SY16 702 aaKnown RBP15.01□□□□□ -0.01
RBM39-216ENST00000444878 XRRA1Q6P2D8 792 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 CATSPERGQ6ZRH7 1159 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 MAEAQ7L5Y9 396 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 SRGAP1Q7Z6B7 1085 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 KSR1Q8IVT5 923 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 DBR1Q9UK59 544 aaKnown RBP15.01□□□□□ -0.01
RBM39-216ENST00000444878 PCDHA13Q9Y5I0 950 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 MYH9P35579 1960 aaKnown RBP15.01□□□□□ -0.01
RBM39-216ENST00000444878 SSU72P8A0A1W2PR75 194 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 LCA5LO95447 670 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 NR3C2P08235 984 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 YWHABP31946 246 aaKnown RBP15.01□□□□□ -0.01
RBM39-216ENST00000444878 SFNP31947 248 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 PSMC2P35998 433 aaKnown RBP15.01□□□□□ -0.01
RBM39-216ENST00000444878 RARRES1P49788 294 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 JAK3P52333 1124 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 KRT76Q01546 638 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 MAPK7Q13164 816 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 TMEM132BQ14DG7 1078 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 NFIL3Q16649 462 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 EXOC3L4Q17RC7 722 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 TEX35Q5T0J7 233 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 VSIG10LQ86VR7 867 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 GOLGA1Q92805 767 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 TEX13BQ9BXU2 312 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 GBP3Q9H0R5 595 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 LARSQ9P2J5 1176 aaKnown RBP15.01□□□□□ -0.01
RBM39-216ENST00000444878 PTPRFP10586 1907 aa15.01□□□□□ -0.01
RBM39-216ENST00000444878 WDR90Q96KV7 1748 aa15□□□□□ -0.01
RBM39-216ENST00000444878 WDR64B1ANS9 1081 aa15□□□□□ -0.01
RBM39-216ENST00000444878 LYPLA2O95372 231 aa15□□□□□ -0.01
RBM39-216ENST00000444878 SERPING1P05155 500 aa15□□□□□ -0.01
RBM39-216ENST00000444878 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
RBM39-216ENST00000444878 H2AFXP16104 143 aaPredicted RBP15□□□□□ -0.01
RBM39-216ENST00000444878 CHMP4BP1P59074 171 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms