RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 GPCPD1Q9NPB8 672 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 PAG1Q9NWQ8 432 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 MTF2Q9Y483 593 aaPredicted RBP16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 TENM4Q6N022 2769 aa16.64■□□□□ 0.25
SYNCRIP-203ENST00000444272 NR3C2P08235 984 aa16.64■□□□□ 0.25
SYNCRIP-203ENST00000444272 LIMK1P53667 647 aa16.64■□□□□ 0.25
SYNCRIP-203ENST00000444272 AASDHQ4L235 1098 aaPredicted RBP16.64■□□□□ 0.25
SYNCRIP-203ENST00000444272 KCNT2Q6UVM3 1135 aa16.64■□□□□ 0.25
SYNCRIP-203ENST00000444272 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
SYNCRIP-203ENST00000444272 ADAM32Q8TC27 787 aa16.64■□□□□ 0.25
SYNCRIP-203ENST00000444272 SFXN1Q9H9B4 322 aa16.64■□□□□ 0.25
SYNCRIP-203ENST00000444272 LAMA1P25391 3075 aa16.64■□□□□ 0.25
SYNCRIP-203ENST00000444272 NMT2O60551 498 aa16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 PPM1AP35813 382 aa16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 MRPS6P82932 125 aaKnown RBP16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 PAK2Q13177 524 aa16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 CCDC6Q16204 474 aa16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 PSAPL1Q6NUJ1 521 aa16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 KCNV1Q6PIU1 500 aa16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 CELF5Q8N6W0 485 aaKnown RBP16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 GLG1Q92896 1179 aa16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 STRBPQ96SI9 672 aaKnown RBP16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 USP26Q9BXU7 913 aa16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 TMX1Q9H3N1 280 aa16.63■□□□□ 0.25
SYNCRIP-203ENST00000444272 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 NOP56O00567 594 aaKnown RBP16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 FOXD2O60548 495 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 CXCL14O95715 111 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 TDO2P48775 406 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 SNW1Q13573 536 aaKnown RBP16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 PPP4R3BQ5MIZ7 849 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 GIMAP6Q6P9H5 292 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 PDZD3Q86UT5 571 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 SLC22A17Q8WUG5 538 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 NXPE3Q969Y0 559 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 ZNF558Q96NG5 402 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 FAM126AQ9BYI3 521 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 BCAS3Q9H6U6 928 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 EPB41L4AQ9HCS5 686 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 PRMT8Q9NR22 394 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 SLC2A4RGQ9NR83 387 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 ZNF215Q9UL58 517 aaPredicted RBP16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 WASF3Q9UPY6 502 aa16.62■□□□□ 0.25
SYNCRIP-203ENST00000444272 LAMA4Q16363 1823 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 DOCK5Q9H7D0 1870 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 FAM170BA6NMN3 283 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 EIF4E1BA6NMX2 242 aaKnown RBP16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 TOP3BO95985 862 aaKnown RBP16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 FGFR1P11362 822 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 MAGEA9P43362 315 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 AUTS2Q8WXX7 1259 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 BBC3Q96PG8 261 aaPredicted RBP16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 IL1RAPL2Q9NP60 686 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 PXMP2Q9NR77 195 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 IL17RBQ9NRM6 502 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 SPG21Q9NZD8 308 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 EPS15L1Q9UBC2 864 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 SQORQ9Y6N5 450 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 DOCK8Q8NF50 2099 aa16.61■□□□□ 0.25
SYNCRIP-203ENST00000444272 MYCLP12524 364 aaPredicted RBP16.6■□□□□ 0.25
SYNCRIP-203ENST00000444272 UTP14CQ5TAP6 766 aaKnown RBP16.6■□□□□ 0.25
SYNCRIP-203ENST00000444272 C19orf48Q6RUI8 117 aa16.6■□□□□ 0.25
SYNCRIP-203ENST00000444272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.6■□□□□ 0.25
SYNCRIP-203ENST00000444272 ST13P5Q8NFI4 369 aaPredicted RBP16.6■□□□□ 0.25
SYNCRIP-203ENST00000444272 BBXQ8WY36 941 aaPredicted RBP16.6■□□□□ 0.25
SYNCRIP-203ENST00000444272 MYADMQ96S97 322 aa16.6■□□□□ 0.25
SYNCRIP-203ENST00000444272 DDX23Q9BUQ8 820 aaKnown RBP16.6■□□□□ 0.25
SYNCRIP-203ENST00000444272 TUBE1Q9UJT0 475 aa16.6■□□□□ 0.25
SYNCRIP-203ENST00000444272 MGEA5O60502 916 aa16.59■□□□□ 0.25
SYNCRIP-203ENST00000444272 TMEM62Q0P6H9 643 aa16.59■□□□□ 0.25
SYNCRIP-203ENST00000444272 BMS1Q14692 1282 aaKnown RBP16.59■□□□□ 0.25
SYNCRIP-203ENST00000444272 TMEM266Q2M3C6 531 aa16.59■□□□□ 0.25
SYNCRIP-203ENST00000444272 LRRC55Q6ZSA7 311 aa16.59■□□□□ 0.25
SYNCRIP-203ENST00000444272 LSM14BQ9BX40 385 aaKnown RBP16.59■□□□□ 0.25
SYNCRIP-203ENST00000444272 OSBPL6Q9BZF3 934 aa16.59■□□□□ 0.25
SYNCRIP-203ENST00000444272 LTB4R2Q9NPC1 389 aa16.59■□□□□ 0.25
SYNCRIP-203ENST00000444272 RXFP3Q9NSD7 469 aa16.59■□□□□ 0.25
SYNCRIP-203ENST00000444272 MYH15Q9Y2K3 1946 aa16.58■□□□□ 0.25
SYNCRIP-203ENST00000444272 TSPY2A6NKD2 308 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 CD72P21854 359 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 NFX1Q12986 1120 aaKnown RBP16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 SF3A2Q15428 464 aaKnown RBP16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 STPG1Q5TH74 334 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 IER5Q5VY09 327 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 C15orf39Q6ZRI6 1047 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 STAMQ92783 540 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 FAM49AQ9H0Q0 323 aaPredicted RBP16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 BOLA2Q9H3K6 86 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 C1orf115Q9H7X2 142 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 TRPV2Q9Y5S1 764 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 IGSF9BQ9UPX0 1349 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 GREB1Q4ZG55 1949 aa16.58■□□□□ 0.24
SYNCRIP-203ENST00000444272 GPC5P78333 572 aa16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 ZNF252P-AS1Q0IIN9 211 aa16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 PPFIA1Q13136 1202 aa16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 SIM2Q14190 667 aaPredicted RBP16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 MLF2Q15773 248 aaPredicted RBP16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 ZFP91Q96JP5 570 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms