RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 RBM25P49756 843 aaKnown RBP23.73■■□□□ 1.39
CDKN3-204ENST00000442975 GUCY1B3Q02153 619 aa23.73■■□□□ 1.39
CDKN3-204ENST00000442975 KRT40Q6A162 431 aa23.73■■□□□ 1.39
CDKN3-204ENST00000442975 PPP4R3AQ6IN85 833 aa23.73■■□□□ 1.39
CDKN3-204ENST00000442975 SPRED2Q7Z698 418 aa23.73■■□□□ 1.39
CDKN3-204ENST00000442975 POTEDQ86YR6 584 aa23.73■■□□□ 1.39
CDKN3-204ENST00000442975 RDM1Q8NG50 284 aa23.73■■□□□ 1.39
CDKN3-204ENST00000442975 PPM1EQ8WY54 764 aa23.73■■□□□ 1.39
CDKN3-204ENST00000442975 MTUS1Q9ULD2 1270 aa23.73■■□□□ 1.39
CDKN3-204ENST00000442975 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.72■■□□□ 1.39
CDKN3-204ENST00000442975 PAK2Q13177 524 aa23.72■■□□□ 1.39
CDKN3-204ENST00000442975 MICALL1Q8N3F8 863 aa23.72■■□□□ 1.39
CDKN3-204ENST00000442975 ZSCAN31Q96LW9 406 aaPredicted RBP23.72■■□□□ 1.39
CDKN3-204ENST00000442975 YME1L1Q96TA2 773 aa23.72■■□□□ 1.39
CDKN3-204ENST00000442975 CELF4Q9BZC1 486 aaKnown RBP23.72■■□□□ 1.39
CDKN3-204ENST00000442975 AGO3Q9H9G7 860 aaKnown RBP23.72■■□□□ 1.39
CDKN3-204ENST00000442975 SEPT9Q9UHD8 586 aaPredicted RBP23.72■■□□□ 1.39
CDKN3-204ENST00000442975 GBF1Q92538 1859 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 BTBD18B2RXH4 712 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 RFXAPO00287 272 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 CLCN3P51790 818 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 RABEP1Q15276 862 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 KIAA0319LQ8IZA0 1049 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 NME8Q8N427 588 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 TNFRSF25Q93038 417 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 KCNMB3Q9NPA1 279 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 SH2B1Q9NRF2 756 aaPredicted RBP23.71■■□□□ 1.39
CDKN3-204ENST00000442975 NRBP2Q9NSY0 501 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 INSL6Q9Y581 213 aa23.71■■□□□ 1.39
CDKN3-204ENST00000442975 EPOPA6NHQ4 379 aa23.7■■□□□ 1.38
CDKN3-204ENST00000442975 SAFBQ15424 915 aaKnown RBP eCLIP23.7■■□□□ 1.38
CDKN3-204ENST00000442975 B3GNT9Q6UX72 402 aa23.7■■□□□ 1.38
CDKN3-204ENST00000442975 USP38Q8NB14 1042 aa23.7■■□□□ 1.38
CDKN3-204ENST00000442975 BANK1Q8NDB2 785 aa23.7■■□□□ 1.38
CDKN3-204ENST00000442975 C8orf76Q96K31 380 aa23.7■■□□□ 1.38
CDKN3-204ENST00000442975 FAM20AQ96MK3 541 aa23.7■■□□□ 1.38
CDKN3-204ENST00000442975 LLPHQ9BRT6 129 aaKnown RBP23.7■■□□□ 1.38
CDKN3-204ENST00000442975 VAV3Q9UKW4 847 aa23.7■■□□□ 1.38
CDKN3-204ENST00000442975 LINC01553A4QN01 128 aa23.69■■□□□ 1.38
CDKN3-204ENST00000442975 VTNP04004 478 aa23.69■■□□□ 1.38
CDKN3-204ENST00000442975 KIZQ2M2Z5 673 aa23.69■■□□□ 1.38
CDKN3-204ENST00000442975 TMEM266Q2M3C6 531 aa23.69■■□□□ 1.38
CDKN3-204ENST00000442975 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.69■■□□□ 1.38
CDKN3-204ENST00000442975 LRRC71Q8N4P6 559 aa23.69■■□□□ 1.38
CDKN3-204ENST00000442975 FAM184AQ8NB25 1140 aa23.69■■□□□ 1.38
CDKN3-204ENST00000442975 MAP7D2Q96T17 732 aa23.69■■□□□ 1.38
CDKN3-204ENST00000442975 AKT3Q9Y243 479 aa23.69■■□□□ 1.38
CDKN3-204ENST00000442975 KDM3AQ9Y4C1 1321 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 TMEM150BA6NC51 233 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 EML1O00423 815 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 MAGEB2O15479 319 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 ST18O60284 1047 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 IBSPP21815 317 aaPredicted RBP23.68■■□□□ 1.38
CDKN3-204ENST00000442975 TBC1D8BQ0IIM8 1120 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 PPP2R5CQ13362 524 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 CCDC85BQ15834 202 aaPredicted RBP23.68■■□□□ 1.38
CDKN3-204ENST00000442975 MTERF2Q49AM1 385 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 NCAPH2Q6IBW4 605 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 TOP1MTQ969P6 601 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 OSMRQ99650 979 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 PADI3Q9ULW8 664 aa23.68■■□□□ 1.38
CDKN3-204ENST00000442975 TBX3O15119 743 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 GTPBP6O43824 516 aaPredicted RBP23.67■■□□□ 1.38
CDKN3-204ENST00000442975 TMOD1P28289 359 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 HMGN5P82970 282 aaKnown RBP23.67■■□□□ 1.38
CDKN3-204ENST00000442975 HTRA4P83105 476 aaPredicted RBP23.67■■□□□ 1.38
CDKN3-204ENST00000442975 NFX1Q12986 1120 aaKnown RBP23.67■■□□□ 1.38
CDKN3-204ENST00000442975 XKR3Q5GH77 459 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 EFCAB12Q6NXP0 572 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 GDPD5Q8WTR4 605 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 LINC01599Q8WXQ3 324 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 HAS1Q92839 578 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 SCLT1Q96NL6 688 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 TGS1Q96RS0 853 aaKnown RBP23.67■■□□□ 1.38
CDKN3-204ENST00000442975 SUGCTQ9HAC7 445 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 SQORQ9Y6N5 450 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 PTPRSQ13332 1948 aa23.67■■□□□ 1.38
CDKN3-204ENST00000442975 NEMFO60524 1076 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 RPS6KA5O75582 802 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 BAG4O95429 457 aaKnown RBP23.66■■□□□ 1.38
CDKN3-204ENST00000442975 ATP2B1P20020 1258 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 CALCRLQ16602 461 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 SLFN12Q8IYM2 578 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 TMEM40Q8WWA1 233 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 SH2D3AQ9BRG2 576 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 FTHL17Q9BXU8 183 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 CDHR5Q9HBB8 845 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 UNC80Q8N2C7 3258 aa23.66■■□□□ 1.38
CDKN3-204ENST00000442975 DDX11L8A8MPP1 907 aa23.65■■□□□ 1.38
CDKN3-204ENST00000442975 ENPP3O14638 875 aa23.65■■□□□ 1.38
CDKN3-204ENST00000442975 PSMC5P62195 406 aa23.65■■□□□ 1.38
CDKN3-204ENST00000442975 GNL2Q13823 731 aaKnown RBP23.65■■□□□ 1.38
CDKN3-204ENST00000442975 PLA2G4FQ68DD2 849 aa23.65■■□□□ 1.38
CDKN3-204ENST00000442975 NOC2LQ9Y3T9 749 aaKnown RBP23.65■■□□□ 1.38
CDKN3-204ENST00000442975 KAT6AQ92794 2004 aa23.65■■□□□ 1.38
CDKN3-204ENST00000442975 SIP14410 1827 aa23.65■■□□□ 1.38
CDKN3-204ENST00000442975 PRUNE2Q8WUY3 3088 aa23.64■■□□□ 1.38
CDKN3-204ENST00000442975 WNT7AO00755 349 aa23.64■■□□□ 1.37
CDKN3-204ENST00000442975 QARSP47897 775 aaKnown RBP23.64■■□□□ 1.37
CDKN3-204ENST00000442975 CRYBB1P53674 252 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms