RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 SH3GLB2Q9NR46 395 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 CYP46A1Q9Y6A2 500 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 WDR64B1ANS9 1081 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 EPB41L2O43491 1005 aaKnown RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 DGKIO75912 1065 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 SSTR3P32745 418 aaPredicted RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 CCT2P78371 535 aaKnown RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 SSRP1Q08945 709 aaKnown RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 PKN1Q16512 942 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 PAN2Q504Q3 1202 aaKnown RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 PTCRAQ6ISU1 281 aaPredicted RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 RUFY3Q7L099 469 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 METTL13Q8N6R0 699 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 RASGRP4Q8TDF6 673 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 ZNF689Q96CS4 500 aaPredicted RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 PABPC5Q96DU9 382 aaKnown RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 MAP7D2Q96T17 732 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 AGXT2Q9BYV1 514 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 RC3H2Q9HBD1 1191 aaKnown RBP13.33□□□□□ -0.28
TTC28-203ENST00000442232 CLDND1Q9NY35 253 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 VPS54Q9P1Q0 977 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 PCDHA10Q9Y5I2 948 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 XIRP2A4UGR9 3374 aa13.33□□□□□ -0.28
TTC28-203ENST00000442232 GPR182O15218 404 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 DHX15O43143 795 aaKnown RBP13.32□□□□□ -0.28
TTC28-203ENST00000442232 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 CSPG5O95196 566 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 TMOD1P28289 359 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 PDIA3P30101 505 aaKnown RBP13.32□□□□□ -0.28
TTC28-203ENST00000442232 CIITAP33076 1130 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 SARSP49591 514 aaKnown RBP13.32□□□□□ -0.28
TTC28-203ENST00000442232 JAK3P52333 1124 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 TMEM266Q2M3C6 531 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 NAALADL2Q58DX5 795 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 SPOUT1Q5T280 376 aaKnown RBP13.32□□□□□ -0.28
TTC28-203ENST00000442232 TRMT1LQ7Z2T5 733 aaKnown RBP13.32□□□□□ -0.28
TTC28-203ENST00000442232 CRYGNQ8WXF5 182 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 LINC01599Q8WXQ3 324 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 TEKT3Q9BXF9 490 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 NCOA5Q9HCD5 579 aaKnown RBP13.32□□□□□ -0.28
TTC28-203ENST00000442232 C1orf112Q9NSG2 853 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 GABBR1Q9UBS5 961 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 AKT3Q9Y243 479 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 PCDHB7Q9Y5E2 793 aa13.32□□□□□ -0.28
TTC28-203ENST00000442232 H3BQ06 376 aaPredicted RBP13.31□□□□□ -0.28
TTC28-203ENST00000442232 GRM6O15303 877 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 MAGEB2O15479 319 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 CHMP2AO43633 222 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 GAS7O60861 476 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 DEXIO95424 95 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 MMP1P03956 469 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 SFNP31947 248 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 CRYBB1P53674 252 aaPredicted RBP13.31□□□□□ -0.28
TTC28-203ENST00000442232 NTRK3Q16288 839 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 KIZQ2M2Z5 673 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 KIAA0319LQ8IZA0 1049 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 P2RX5Q93086 422 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 SCLT1Q96NL6 688 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 PPP1R16BQ96T49 567 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 ERVK-5Q9HDB9 667 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 AAASQ9NRG9 546 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 NRBP2Q9NSY0 501 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 NOC2LQ9Y3T9 749 aaKnown RBP13.31□□□□□ -0.28
TTC28-203ENST00000442232 MAFBQ9Y5Q3 323 aaPredicted RBP13.31□□□□□ -0.28
TTC28-203ENST00000442232 MRPL42Q9Y6G3 142 aaKnown RBP13.31□□□□□ -0.28
TTC28-203ENST00000442232 FNDC1Q4ZHG4 1894 aaPredicted RBP13.31□□□□□ -0.28
TTC28-203ENST00000442232 MUC3AQ02505 3323 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 MYO7AQ13402 2215 aa13.31□□□□□ -0.28
TTC28-203ENST00000442232 CDKL5O76039 1030 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 C22orf31O95567 290 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 OATP04181 439 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 USP11P51784 963 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 EVCP57679 992 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 LRCH2Q5VUJ6 765 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 FAM177A1Q8N128 213 aaPredicted RBP13.3□□□□□ -0.28
TTC28-203ENST00000442232 GJD3Q8N144 294 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 ZNF710Q8N1W2 664 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.3□□□□□ -0.28
TTC28-203ENST00000442232 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 RIT2Q99578 217 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 OSMRQ99650 979 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 ADAM2Q99965 735 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 ZSWIM6Q9HCJ5 1215 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 ALG13Q9NP73 1137 aaKnown RBP13.3□□□□□ -0.28
TTC28-203ENST00000442232 DISC1Q9NRI5 854 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 PCDHA4Q9UN74 947 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 PCDHB12Q9Y5F1 795 aa13.3□□□□□ -0.28
TTC28-203ENST00000442232 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 ZBTB42B2RXF5 422 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 MSH4O15457 936 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 VTNP04004 478 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 IL9P15248 144 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 ATP4AP20648 1035 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 CLCN3P51790 818 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 PRKCEQ02156 737 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 STK3Q13188 491 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 TOB2Q14106 344 aaPredicted RBP13.29□□□□□ -0.28
TTC28-203ENST00000442232 TMEM31Q5JXX7 168 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms