RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ASTN1O14525 1302 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 TMCO5BA8MYB1 307 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 RSPH10B2B2RC85 870 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 F5H6K3 240 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 RSPH10BP0C881 870 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 KLRC3Q07444 240 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 SHROOM1Q2M3G4 852 aaPredicted RBP18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 TTC31Q49AM3 519 aaPredicted RBP18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 KDM7AQ6ZMT4 941 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 PGRMC1O00264 195 aaKnown RBP18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 MSH4O15457 936 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 H2AFZP0C0S5 128 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 CASP4P49662 377 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 SNAP25P60880 206 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 CUL1Q13616 776 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 H2AFVQ71UI9 128 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 PEX26Q7Z412 305 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 TPCN2Q8NHX9 752 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 PCDHB13Q9Y5F0 798 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 FAM169AQ9Y6X4 670 aa18.01■□□□□ 0.47
SEMA3B-207ENST00000441915 ATP8B3O60423 1300 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 GTPBP10A4D1E9 387 aaKnown RBP18■□□□□ 0.47
SEMA3B-207ENST00000441915 NDUFAB1O14561 156 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 CLIC2O15247 247 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 HSPA9P38646 679 aaKnown RBP18■□□□□ 0.47
SEMA3B-207ENST00000441915 CACNB3P54284 484 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 TADA2BQ86TJ2 420 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 DNAAF5Q86Y56 855 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 C1orf131Q8NDD1 294 aaKnown RBP18■□□□□ 0.47
SEMA3B-207ENST00000441915 ZDHHC15Q96MV8 337 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 BUD13Q9BRD0 619 aaKnown RBP eCLIP18■□□□□ 0.471e-10■■□□□ 13.2
SEMA3B-207ENST00000441915 ADAMTSL1Q8N6G6 1762 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 DDTLA6NHG4 134 aaPredicted RBP18■□□□□ 0.47
SEMA3B-207ENST00000441915 NR1D1P20393 614 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 CIITAP33076 1130 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 ZNF76P36508 570 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 JAM2P57087 298 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 MAATS1Q7Z4T9 603 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 SYCE1Q8N0S2 351 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 METTL13Q8N6R0 699 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 POLR3CQ9BUI4 534 aaPredicted RBP18■□□□□ 0.47
SEMA3B-207ENST00000441915 RUSC1Q9BVN2 902 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 OLFML3Q9NRN5 406 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 A0A0A6YYK5 440 aaPredicted RBP18■□□□□ 0.47
SEMA3B-207ENST00000441915 LOC102724159A0A0B4J2E5 919 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 GOLGA6L10A6NI86 522 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 PPP1R12BO60237 982 aaPredicted RBP18■□□□□ 0.47
SEMA3B-207ENST00000441915 ZEB2O60315 1214 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 EYA4O95677 639 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 ERVK-9P63128 1117 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 PWP2Q15269 919 aaKnown RBP18■□□□□ 0.47
SEMA3B-207ENST00000441915 PTPROQ16827 1216 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 EMC10Q5UCC4 262 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 TMEM179Q6ZVK1 233 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 ATP6V1G3Q96LB4 118 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 EIF2AK1Q9BQI3 630 aaKnown RBP18■□□□□ 0.47
SEMA3B-207ENST00000441915 SIX2Q9NPC8 291 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 VAV3Q9UKW4 847 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 INTUQ9ULD6 942 aa18■□□□□ 0.47
SEMA3B-207ENST00000441915 HMGB1P1B2RPK0 211 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 CCDC188H7C350 402 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 SART1O43290 800 aaKnown RBP17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 FERP16591 822 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 KCNA1Q09470 495 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 SIAH1Q8IUQ4 282 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 KCTD17Q8N5Z5 321 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 RNPC3Q96LT9 517 aaKnown RBP17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 AP1M1Q9BXS5 423 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 TMX4Q9H1E5 349 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 POLD4Q9HCU8 107 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 PLAAQ9Y263 795 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 NOC2LQ9Y3T9 749 aaKnown RBP17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 GAP43P17677 238 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 GUCY2CP25092 1073 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 CEP85LQ5SZL2 805 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 SLFN11Q7Z7L1 901 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 DAAM2Q86T65 1068 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 LRRC45Q96CN5 670 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 NENFQ9UMX5 172 aa17.99■□□□□ 0.47
SEMA3B-207ENST00000441915 KRIT1O00522 736 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 STAT1P42224 750 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.473e-6■■□□□ 12.7
SEMA3B-207ENST00000441915 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 RINT1Q6NUQ1 792 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 PACS2Q86VP3 889 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 GMCL1P1Q8NEA9 526 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 CYP2W1Q8TAV3 490 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 GMCL1Q96IK5 515 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 RGL1Q9NZL6 768 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 SUCLA2Q9P2R7 463 aaPredicted RBP17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 AJAP1Q9UKB5 411 aaPredicted RBP17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 SFI1A8K8P3 1242 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 DDX3XO00571 662 aaKnown RBP eCLIP17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 HOXA13P31271 388 aaPredicted RBP17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 PSMC2P35998 433 aaKnown RBP17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 TATDN1Q6P1N9 297 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 GJB7Q6PEY0 223 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 B4GALNT4Q76KP1 1039 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 KIAA0825Q8IV33 1275 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms