RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CENPPQ6IPU0 288 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 TMEM139Q8IV31 216 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 DCAF4Q8WV16 495 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 MCUR1Q96AQ8 359 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 KLHL29Q96CT2 875 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 RAB3IPQ96QF0 476 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 EPN3Q9H201 632 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 KCNG1Q9UIX4 513 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 USP21Q9UK80 565 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 RIMBP3CA6NJZ7 1639 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 RIMBP3BA6NNM3 1639 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 RIMBP3Q9UFD9 1639 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 PALM3A6NDB9 673 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 H0YIN7 160 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 PDXKO00764 312 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ALAS1P13196 640 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 UCHL3P15374 230 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 SMARCA1P28370 1054 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 LSP1P33241 339 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 PDE6BP35913 854 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 BPIFB4P59827 614 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 DRAP1Q14919 205 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 EDRF1Q3B7T1 1238 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 GLYCTKQ8IVS8 523 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 MICAL1Q8TDZ2 1067 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 RFFLQ8WZ73 363 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 POMGNT1Q8WZA1 660 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 CCT8L2Q96SF2 557 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 RAB20Q9NX57 234 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 EHD2Q9NZN4 543 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ZNF148Q9UQR1 794 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 A0A0U1RQJ8 604 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 TESPA1A2RU30 521 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 TROVE2P10155 538 aaKnown RBP eCLIP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 CD19P15391 556 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ATF7P17544 494 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 GUCY2CP25092 1073 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ANXA13P27216 316 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 SNAP25P60880 206 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 IL9RQ01113 521 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 DMP1Q13316 513 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ZNF211Q13398 564 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ITPK1Q13572 414 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 FAM133BQ5BKY9 247 aaKnown RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ANKRD20A3Q5VUR7 823 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 C16orf86Q6ZW13 317 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ANKS1AQ92625 1134 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 SYN2Q92777 582 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 CSRNP1Q96S65 589 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ELAC2Q9BQ52 826 aaKnown RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ARHGAP20Q9P2F6 1191 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 FLT1P17948 1338 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 FAM187AA6NFU0 413 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 RAD51CO43502 376 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ZBED4O75132 1171 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 PDHBP11177 359 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 STAT2P52630 851 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 RWDD2BP57060 319 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ZNF543Q08ER8 600 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 TTBK2Q6IQ55 1244 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 CCDC62Q6P9F0 684 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 CAPN12Q6ZSI9 719 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ARHGEF18Q6ZSZ5 1173 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ARHGAP27Q6ZUM4 889 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 TMEM179Q6ZVK1 233 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 VPS52Q8N1B4 723 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 CCDC89Q8N998 374 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 SPATA20Q8TB22 786 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 HOOK2Q96ED9 719 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 MPHOSPH6Q99547 160 aaKnown RBP7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ANAPC5Q9UJX4 755 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 CCPG1Q9ULG6 757 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ACTN1P12814 892 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 LIG4P49917 911 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 PMS2P54278 862 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 GRB10Q13322 594 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 FAM182BQ5T319 152 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 INTS5Q6P9B9 1019 aaKnown RBP7.22□□□□□ -1.25
CSDE1-205ENST00000438362 MCF2L2Q86YR7 1114 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ANKRD35Q8N283 1001 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 USP38Q8NB14 1042 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ZNF473Q8WTR7 871 aaKnown RBP7.22□□□□□ -1.25
CSDE1-205ENST00000438362 TRIM11Q96F44 468 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 SEMA6BQ9H3T3 888 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 NPHP3-ACAD11A0A0J9YXS1 232 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 TCP10L2B9ZVM9 353 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 HNRNPDLO14979 420 aaKnown RBP7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ACSL3O95573 720 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 RPSAP08865 295 aaKnown RBP7.22□□□□□ -1.25
CSDE1-205ENST00000438362 SLC9A1P19634 815 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 KLRK1P26718 216 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 GPC5P78333 572 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 LMNB2Q03252 620 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ALCAMQ13740 583 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 EZH2Q15910 746 aaKnown RBP7.22□□□□□ -1.25
CSDE1-205ENST00000438362 TBC1D10BQ4KMP7 808 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-205ENST00000438362 CYP4F22Q6NT55 531 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 LRIG3Q6UXM1 1119 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 SLC17A8Q8NDX2 589 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms