RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 FTHL17Q9BXU8 183 aa10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 AGXT2Q9BYV1 514 aa10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 TMX1Q9H3N1 280 aa10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 ALG13Q9NP73 1137 aaKnown RBP10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 CLDND1Q9NY35 253 aa10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 GABBR1Q9UBS5 961 aa10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 LRFN2Q9ULH4 789 aa10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 NOC2LQ9Y3T9 749 aaKnown RBP10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 RWDD3Q9Y3V2 267 aa10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 SAMM50Q9Y512 469 aa10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 COL4A6Q14031 1691 aa10.09□□□□□ -0.79
CTDSPL-205ENST00000436654 KDM3AQ9Y4C1 1321 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 DOCK5Q9H7D0 1870 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 DENND3A2RUS2 1198 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 CHMP2AO43633 222 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 MGEA5O60502 916 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 RPS6KA5O75582 802 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 C22orf31O95567 290 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 VTNP04004 478 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 PSAPP07602 524 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 STAG3L1P0CL83 205 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 IFNAR1P17181 557 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 SSTR3P32745 418 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 NLRP5P59047 1200 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 HYAL1Q12794 435 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 TOB2Q14106 344 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 CLUL1Q15846 466 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 TMEM31Q5JXX7 168 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 RUFY3Q7L099 469 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 FAM178BQ8IXR5 827 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 SMAP1Q8IYB5 467 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 CMTR2Q8IYT2 770 aaKnown RBP10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 CRIPAKQ8N1N5 446 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 NEK9Q8TD19 979 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 TMEM40Q8WWA1 233 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 LENG9Q96B70 501 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 PABPC5Q96DU9 382 aaKnown RBP10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 OSMRQ99650 979 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 ADAM2Q99965 735 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 LRFN3Q9BTN0 628 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 RNF26Q9BY78 433 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 LMAN2LQ9H0V9 348 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 IGFLR1Q9H665 355 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 ERVK-5Q9HDB9 667 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 PCDHA10Q9Y5I2 948 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 MAFBQ9Y5Q3 323 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 COL1A2P08123 1366 aa10.08□□□□□ -0.8
CTDSPL-205ENST00000436654 FAM86C2PA6NEL3 165 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 GRXCR2A6NFK2 248 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 MSH4O15457 936 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 EDIL3O43854 480 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 CIITAP33076 1130 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 GTF2F1P35269 517 aaKnown RBP eCLIP10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 SARSP49591 514 aaKnown RBP10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 CLCN3P51790 818 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 EVCP57679 992 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 SSRP1Q08945 709 aaKnown RBP10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 STK3Q13188 491 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 ALYREFQ86V81 257 aaKnown RBP10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 BBXQ8WY36 941 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 GJA10Q969M2 543 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 ZNF668Q96K58 619 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 UPF3BQ9BZI7 483 aaKnown RBP10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 ZSWIM6Q9HCJ5 1215 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 ST3GAL5Q9UNP4 418 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 PLAGL2Q9UPG8 496 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 CYP46A1Q9Y6A2 500 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 BDP1A6H8Y1 2624 aa10.07□□□□□ -0.8
CTDSPL-205ENST00000436654 TBKBP1A7MCY6 615 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 WDR64B1ANS9 1081 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 CPLX1O14810 134 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 GPR182O15218 404 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 LINC01565O15544 149 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 ZNF862O60290 1169 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 GAS7O60861 476 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 GPR32O75388 356 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 MMP1P03956 469 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 ITGB1P05556 798 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 DNAJB1P25685 340 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 LTBRP36941 435 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 CRYBB1P53674 252 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 DLX2Q07687 328 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 CAMK1Q14012 370 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 COL19A1Q14993 1142 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 UGCGQ16739 394 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 PUS10Q3MIT2 529 aaKnown RBP10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 SPOUT1Q5T280 376 aaKnown RBP10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 FAM102BQ5T8I3 360 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 EFCAB12Q6NXP0 572 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 FAM228AQ86W67 206 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 GJD3Q8N144 294 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 LRRC71Q8N4P6 559 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 KLHL23Q8NBE8 558 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 SPPL3Q8TCT6 385 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 TBCKQ8TEA7 893 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 AIFM3Q96NN9 605 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 PLVAPQ9BX97 442 aa10.06□□□□□ -0.8
CTDSPL-205ENST00000436654 UNC45AQ9H3U1 944 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms