RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 TRIM50Q86XT4 487 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 KLHDC9Q8NEP7 349 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
AC004448.3-201ENST00000435953 DDX12PQ92771 950 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 SMARCE1Q969G3 411 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 DNAJC19Q96DA6 116 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 FAM167AQ96KS9 214 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 GSDMAQ96QA5 445 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 SH2D3AQ9BRG2 576 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 RUSC1Q9BVN2 902 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 XPNPEP3Q9NQH7 507 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 CYP26B1Q9NR63 512 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 KCND2Q9NZV8 630 aa11□□□□□ -0.65
AC004448.3-201ENST00000435953 MYH15Q9Y2K3 1946 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 DOCK3Q8IZD9 2030 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 NPHP3-ACAD11A0A0J9YXS1 232 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 PVALEFA0A1B0GWK0 134 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 SYCE3A1L190 88 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 KLRC4O43908 158 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 ADAMTS4O75173 837 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 RPN1P04843 607 aaKnown RBP10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 KRT18P05783 430 aaKnown RBP10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 GUCY2CP25092 1073 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 ZNF484Q5JVG2 852 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 FBXO46Q6PJ61 603 aaPredicted RBP10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 SASS6Q6UVJ0 657 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 DYMQ7RTS9 669 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 KAT2BQ92831 832 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 CCDC43Q96MW1 224 aaKnown RBP10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 CEP89Q96ST8 783 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 PDLIM7Q9NR12 457 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 SEPT9Q9UHD8 586 aaPredicted RBP10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 ZNF215Q9UL58 517 aaPredicted RBP10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 PPME1Q9Y570 386 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 SYNRGQ9UMZ2 1314 aa10.99□□□□□ -0.65
AC004448.3-201ENST00000435953 MYADML2A6NDP7 307 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 HAS3O00219 553 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 F2P00734 622 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 ZNF286BP0CG31 522 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 INSRRP14616 1297 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 PSEN2P49810 448 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 ZNF445P59923 1031 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 ASIC1P78348 528 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 PURAQ00577 322 aaKnown RBP10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 RAD51AP2Q09MP3 1159 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 KCNB1Q14721 858 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 KCNA10Q16322 511 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 MTERF2Q49AM1 385 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 KMT5BQ4FZB7 885 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 ISM2Q6H9L7 571 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 CCSAPQ6IQ19 270 aaPredicted RBP10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 UNC13DQ70J99 1090 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 RNF180Q86T96 592 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 EXOC8Q8IYI6 725 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 PCSK9Q8NBP7 692 aaKnown RBP10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 MTG1Q9BT17 334 aaPredicted RBP10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 TIPINQ9BVW5 301 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 UNC93B1Q9H1C4 597 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 POLD4Q9HCU8 107 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 PANK4Q9NVE7 773 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 RMND1Q9NWS8 449 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 MAN1B1Q9UKM7 699 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 HTTP42858 3142 aa10.98□□□□□ -0.65
AC004448.3-201ENST00000435953 FRMD3A2A2Y4 597 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 SFI1A8K8P3 1242 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 ZBTB42B2RXF5 422 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 BIN1O00499 593 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 USO1O60763 962 aaKnown RBP10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 MAFO75444 373 aaPredicted RBP10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 DGAT1O75907 488 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 CCL5P13501 91 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 IDEP14735 1019 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 CST5P28325 142 aaPredicted RBP10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 RFC5P40937 340 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 NLRP12P59046 1061 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 PSMD2Q13200 908 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 MORC3Q14149 939 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 MFSD10Q14728 455 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 LRRC41Q15345 812 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 MTFR1Q15390 333 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 LRSAM1Q6UWE0 723 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 MAEAQ7L5Y9 396 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 TRIML1Q8N9V2 468 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 ARRDC4Q8NCT1 418 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 CCDC47Q96A33 483 aaKnown RBP10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 REEP2Q9BRK0 252 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 TSEN34Q9BSV6 310 aaKnown RBP10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 FUCA2Q9BTY2 467 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 RNF208Q9H0X6 261 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 DHX33Q9H6R0 707 aaKnown RBP10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 PAK6Q9NQU5 681 aaPredicted RBP10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 PRDM10Q9NQV6 1147 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 COL4A3BPQ9Y5P4 624 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 ZSWIM8A7E2V4 1837 aa10.97□□□□□ -0.65
AC004448.3-201ENST00000435953 IGKV6-21A0A0C4DH24 114 aa10.96□□□□□ -0.65
AC004448.3-201ENST00000435953 RRN3P2A6NIE6 340 aa10.96□□□□□ -0.65
AC004448.3-201ENST00000435953 MAGEB2O15479 319 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms