RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 TMEM260Q9NX78 707 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 SLC12A7Q9Y666 1083 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 FNDC1Q4ZHG4 1894 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 BACH1O14867 736 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 LIFRP42702 1097 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 SIGLEC14Q08ET2 396 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 ITGB3BPQ13352 177 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 COL9A3Q14050 684 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 DUSP6Q16828 381 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 ODR4Q5SWX8 454 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 TMTC3Q6ZXV5 915 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 SLC24A5Q71RS6 500 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 FANCBQ8NB91 859 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 COLGALT1Q8NBJ5 622 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 VN1R2Q8NFZ6 395 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 ATP8B4Q8TF62 1192 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 NEK1Q96PY6 1258 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 PPP1R16BQ96T49 567 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 LRRC2Q9BYS8 371 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 AGO4Q9HCK5 861 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 RGS18Q9NS28 235 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 C1orf112Q9NSG2 853 aa13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 TYW1Q9NV66 732 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-207ENST00000435083 HBP1O60381 514 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 ATG7O95352 703 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 ATF7P17544 494 aaPredicted RBP13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 ZNF76P36508 570 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 SLC26A2P50443 739 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 NAPAP54920 295 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 APOBRQ0VD83 1088 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 TCF15Q12870 199 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 CEP55Q53EZ4 464 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 FAM160B1Q5W0V3 765 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 PDE12Q6L8Q7 609 aaKnown RBP13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 MICU3Q86XE3 530 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 KIAA0319LQ8IZA0 1049 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 TMEM40Q8WWA1 233 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 CDCA3Q99618 268 aaPredicted RBP13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 APOL5Q9BWW9 433 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 ST3GAL5Q9UNP4 418 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 C5orf42Q9H799 3197 aa13.22□□□□□ -0.29
CHRNA1-207ENST00000435083 FSD2A1L4K1 749 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 C9IYK1 514 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 GPR182O15218 404 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 CCNE2O96020 404 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 FOSP01100 380 aaPredicted RBP13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 SRGAP2BP0DMP2 458 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 FGFR1P11362 822 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 TECP42680 631 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 PLPP4Q5VZY2 271 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 SUSD6Q92537 303 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 ANO3Q9BYT9 981 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 RIC8AQ9NPQ8 531 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 FAM86C1Q9NVL1 165 aa13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 PUF60Q9UHX1 559 aaKnown RBP13.21□□□□□ -0.29
CHRNA1-207ENST00000435083 EVPLQ92817 2033 aa13.21□□□□□ -0.3
CHRNA1-207ENST00000435083 KMT2EQ8IZD2 1858 aa13.21□□□□□ -0.3
CHRNA1-207ENST00000435083 COL1A2P08123 1366 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 IGKV6D-21A0A0A0MT36 114 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 MEIS1O00470 390 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 FSCN2O14926 492 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 SLC27A2O14975 620 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 ST18O60284 1047 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 LAG3P18627 525 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 SP100P23497 879 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 AVPR2P30518 371 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 ADCY7P51828 1080 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 KIZQ2M2Z5 673 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 ZNF484Q5JVG2 852 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 ANKRD54Q6NXT1 300 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 LLGL2Q6P1M3 1020 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 PDXDC2PQ6P474 469 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 ABHD15Q6UXT9 468 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 FAM43BQ6ZT52 329 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 TRMT1LQ7Z2T5 733 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 CKAP2LQ8IYA6 745 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 YTHDC1Q96MU7 727 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 CWH43Q9H720 699 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 ENTPD7Q9NQZ7 604 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 ZNF302Q9NR11 478 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 TMEM161AQ9NX61 479 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 CRYBB1P53674 252 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 PTPN21Q16825 1174 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 TYW1BQ6NUM6 668 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 SWSAP1Q6NVH7 229 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 MIS18BP1Q6P0N0 1132 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 FAM228AQ86W67 206 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 CCDC60Q8IWA6 550 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 ASIC4Q96FT7 647 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 OSMRQ99650 979 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 TCF25Q9BQ70 676 aa13.2□□□□□ -0.3
CHRNA1-207ENST00000435083 S1PR5Q9H228 398 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms