RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 NID2Q14112 1375 aa10.75□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TCF20Q9UGU0 1960 aaKnown RBP10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 RRN3P2A6NIE6 340 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 MEIS1O00470 390 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 RPLP2P05387 115 aaKnown RBP10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ARP10275 920 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 GHRP10912 638 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 INSRRP14616 1297 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ACTR2P61160 394 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 EPC2Q52LR7 807 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 FBXO47Q5MNV8 452 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 NIPA1Q7RTP0 329 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 PLPPR4Q7Z2D5 763 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 RSPH3Q86UC2 560 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 DNAJB3Q8WWF6 145 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 CRYGNQ8WXF5 182 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 MRPL38Q96DV4 380 aaKnown RBP10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 PGBD1Q96JS3 809 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 SDF4Q9BRK5 362 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 GLT8D2Q9H1C3 349 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TMEM134Q9H6X4 195 aa10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 RC3H2Q9HBD1 1191 aaKnown RBP10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 AGO4Q9HCK5 861 aaKnown RBP10.74□□□□□ -0.69
CDC42-IT1-201ENST00000431803 IGKV6D-21A0A0A0MT36 114 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ESYT2A0FGR8 921 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 SMCO2A6NFE2 343 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 H3BNC9 293 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 UPP2O95045 317 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ATG7O95352 703 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 OATP04181 439 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 LINC00271P0C7V0 271 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 HSPA4P34932 840 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ADD1P35611 737 aaKnown RBP10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 MRPS6P82932 125 aaKnown RBP10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 PLCB4Q15147 1175 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 PFKFB3Q16875 520 aaPredicted RBP10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TSHZ1Q6ZSZ6 1077 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 FBXL16Q8N461 479 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ZBTB10Q96DT7 871 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 AZI2Q9H6S1 392 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TMEM260Q9NX78 707 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 CDY2AQ9Y6F7 541 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 C5orf42Q9H799 3197 aa10.73□□□□□ -0.69
CDC42-IT1-201ENST00000431803 RALGAPA2Q2PPJ7 1873 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TTC3P53804 2025 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 IGLV3-22A0A075B6J6 115 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 CCDC196A0A1B0GTZ2 297 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 FAM86B1E9PN63 330 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 CCNE2O96020 404 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 FAM86B2P0C5J1 330 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 SCG2P13521 617 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 CPA1P15085 419 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 SLC26A2P50443 739 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 METAP2P50579 478 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 STAT5BP51692 787 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 IGBP1P78318 339 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 KCNC4Q03721 635 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 COL19A1Q14993 1142 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TMEM192Q8IY95 271 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 CRIPAKQ8N1N5 446 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 LINC01599Q8WXQ3 324 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 IL17RAQ96F46 866 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 AGXT2Q9BYV1 514 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ZMYND12Q9H0C1 365 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 UBE2ZQ9H832 354 aaPredicted RBP10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 AGO3Q9H9G7 860 aaKnown RBP10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 PCDHA2Q9Y5H9 948 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 SNX14Q9Y5W7 946 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 SQORQ9Y6N5 450 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ADGRA3Q8IWK6 1321 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 NLRC5Q86WI3 1866 aa10.72□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TRIOO75962 3097 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 SMIM35A0A1B0GVV1 85 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 C5orf67F2Z3F1 127 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ENPP3O14638 875 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ADAMTS3O15072 1205 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 DHX15O43143 795 aaKnown RBP10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 CYP3A4P08684 503 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 APOBRQ0VD83 1088 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 PKN1Q16512 942 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 PTPROQ16827 1216 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TIGD5Q53EQ6 642 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 IER5Q5VY09 327 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ABHD15Q6UXT9 468 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 Q6ZUG5 572 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 METTL3Q86U44 580 aaKnown RBP10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TRAPPC12Q8WVT3 735 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TNPO1Q92973 898 aaKnown RBP10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 CLP1Q92989 425 aaKnown RBP10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 BRF1Q92994 677 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 ZNF689Q96CS4 500 aaPredicted RBP10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 JAKMIP1Q96N16 626 aaKnown RBP10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 FAM49AQ9H0Q0 323 aaPredicted RBP10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 IGSF9BQ9UPX0 1349 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 KDM3AQ9Y4C1 1321 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 TRPV2Q9Y5S1 764 aa10.71□□□□□ -0.69
CDC42-IT1-201ENST00000431803 IPO5O00410 1097 aaKnown RBP10.7□□□□□ -0.7
CDC42-IT1-201ENST00000431803 PRPF3O43395 683 aaKnown RBP10.7□□□□□ -0.7
CDC42-IT1-201ENST00000431803 RPS6KB1P23443 525 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms