RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PANK4Q9NVE7 773 aa9.88□□□□□ -0.83
SMC6-204ENST00000428868 SEPT9Q9UHD8 586 aaPredicted RBP9.88□□□□□ -0.83
SMC6-204ENST00000428868 PCDHA2Q9Y5H9 948 aa9.88□□□□□ -0.83
SMC6-204ENST00000428868 TRIP11Q15643 1979 aa9.88□□□□□ -0.83
SMC6-204ENST00000428868 ARHGEF35A5YM69 484 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 RBAK-RBAKDNI3L0D1 243 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 HIP1RO75146 1068 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 KRT18P05783 430 aaKnown RBP9.87□□□□□ -0.83
SMC6-204ENST00000428868 MARK3P27448 753 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 MAP2K2P36507 400 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 FLT3LGP49771 235 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 MTERF2Q49AM1 385 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 HSP90AA4PQ58FG1 418 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 OLFML2BQ68BL8 750 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 KCNV1Q6PIU1 500 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 PADI6Q6TGC4 694 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 MAEAQ7L5Y9 396 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 AFG1LQ8WV93 481 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 SOCS4Q8WXH5 440 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 BPIFA3Q9BQP9 254 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 ABHD16BQ9H3Z7 469 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 ZHX3Q9H4I2 956 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 GPRC5CQ9NQ84 441 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 RMND1Q9NWS8 449 aa9.87□□□□□ -0.83
SMC6-204ENST00000428868 DBR1Q9UK59 544 aaKnown RBP9.87□□□□□ -0.83
SMC6-204ENST00000428868 MAFBQ9Y5Q3 323 aaPredicted RBP9.87□□□□□ -0.83
SMC6-204ENST00000428868 SYNRGQ9UMZ2 1314 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 PVALEFA0A1B0GWK0 134 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 LGR5O75473 907 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 GH1P01241 217 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 OATP04181 439 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 ZNF286BP0CG31 522 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 ELNP15502 786 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 MAP2K1Q02750 393 aaPredicted RBP9.86□□□□□ -0.83
SMC6-204ENST00000428868 DUSP28Q4G0W2 176 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 XKR9Q5GH70 373 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 FAM26FQ5R3K3 315 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
SMC6-204ENST00000428868 ADSSL1Q8N142 457 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 MLKLQ8NB16 471 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 PPP1R13LQ8WUF5 828 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 NELFBQ8WX92 580 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 SEPT1Q8WYJ6 367 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 ATP6V0A1Q93050 837 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 ZBTB10Q96DT7 871 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 FIZ1Q96SL8 496 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 CEP89Q96ST8 783 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 IKZF4Q9H2S9 585 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 XPNPEP1Q9NQW7 623 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 ANKEF1Q9NU02 776 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 SLC5A4Q9NY91 659 aa9.86□□□□□ -0.83
SMC6-204ENST00000428868 GNEQ9Y223 722 aaKnown RBP9.86□□□□□ -0.83
SMC6-204ENST00000428868 EMSYQ7Z589 1322 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 GPR25O00155 361 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 NOP56O00567 594 aaKnown RBP9.85□□□□□ -0.83
SMC6-204ENST00000428868 LGALS2P05162 132 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 MMP3P08254 477 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 MYBP10242 640 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 ATP1A3P13637 1013 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 GUCY2CP25092 1073 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 NMT1P30419 496 aaKnown RBP9.85□□□□□ -0.83
SMC6-204ENST00000428868 HOXD13P35453 343 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 STAT5BP51692 787 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 MYL5Q02045 173 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 TNFAIP2Q03169 654 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 PLCB4Q15147 1175 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 HERC4Q5GLZ8 1057 aaPredicted RBP9.85□□□□□ -0.83
SMC6-204ENST00000428868 L1TD1Q5T7N2 865 aaKnown RBP9.85□□□□□ -0.83
SMC6-204ENST00000428868 KSR1Q8IVT5 923 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 CCDC65Q8IXS2 484 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 MSL3Q8N5Y2 521 aaKnown RBP9.85□□□□□ -0.83
SMC6-204ENST00000428868 OR6J1Q8NGC5 347 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 AFAP1L1Q8TED9 768 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 TRAPPC12Q8WVT3 735 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 BSNDQ8WZ55 320 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 CEP170P1Q96L14 293 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 LRRC27Q9C0I9 530 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 SEMA6BQ9H3T3 888 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 PDLIM7Q9NR12 457 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 SAMSN1Q9NSI8 373 aaKnown RBP9.85□□□□□ -0.83
SMC6-204ENST00000428868 ZMYM2Q9UBW7 1377 aa9.85□□□□□ -0.83
SMC6-204ENST00000428868 DNAH12Q6ZR08 3092 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 MYADML2A6NDP7 307 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 ZBTB42B2RXF5 422 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 IKBKBO14920 756 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 NKRFO15226 690 aaKnown RBP eCLIP9.84□□□□□ -0.835e-6■□□□□ 8.5
SMC6-204ENST00000428868 TBCAO75347 108 aaKnown RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 PRPF6O94906 941 aaKnown RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 FAM13AO94988 1023 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 CYBAP13498 195 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 ZNF131P52739 623 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 KCNA1Q09470 495 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 PAK1Q13153 545 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 LAMC2Q13753 1193 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 TARBP2Q15633 366 aaKnown RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 UVSSAQ2YD98 709 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 ZC2HC1CQ53FD0 456 aaPredicted RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 XKR3Q5GH77 459 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 FAM160B1Q5W0V3 765 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 IQSEC1Q6DN90 963 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms