RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 LTBRP36941 435 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 PAK2Q13177 524 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 FAM160B1Q5W0V3 765 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 PTCRAQ6ISU1 281 aaPredicted RBP17.62■□□□□ 0.41
SEC13-210ENST00000428626 MIS18BP1Q6P0N0 1132 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 TRMT1LQ7Z2T5 733 aaKnown RBP17.62■□□□□ 0.41
SEC13-210ENST00000428626 FAM178BQ8IXR5 827 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 NME8Q8N427 588 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 TNPO1Q92973 898 aaKnown RBP17.62■□□□□ 0.41
SEC13-210ENST00000428626 GJA10Q969M2 543 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 PPP1R16BQ96T49 567 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 LARP6Q9BRS8 491 aaKnown RBP17.62■□□□□ 0.41
SEC13-210ENST00000428626 FTHL17Q9BXU8 183 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 RNF26Q9BY78 433 aaPredicted RBP17.62■□□□□ 0.41
SEC13-210ENST00000428626 ALG13Q9NP73 1137 aaKnown RBP17.62■□□□□ 0.41
SEC13-210ENST00000428626 C11orf16Q9NQ32 467 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 GINS2Q9Y248 185 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 GRXCR2A6NFK2 248 aa17.61■□□□□ 0.41
SEC13-210ENST00000428626 M0QZ92 97 aa17.61■□□□□ 0.41
SEC13-210ENST00000428626 GNA11P29992 359 aa17.61■□□□□ 0.41
SEC13-210ENST00000428626 PAN2Q504Q3 1202 aaKnown RBP17.61■□□□□ 0.41
SEC13-210ENST00000428626 ZNF484Q5JVG2 852 aa17.61■□□□□ 0.41
SEC13-210ENST00000428626 ZNF746Q6NUN9 644 aaPredicted RBP17.61■□□□□ 0.41
SEC13-210ENST00000428626 NPAS4Q8IUM7 802 aa17.61■□□□□ 0.41
SEC13-210ENST00000428626 PABPC5Q96DU9 382 aaKnown RBP17.61■□□□□ 0.41
SEC13-210ENST00000428626 C11orf84Q9BUA3 381 aaPredicted RBP17.61■□□□□ 0.41
SEC13-210ENST00000428626 ZSWIM6Q9HCJ5 1215 aa17.61■□□□□ 0.41
SEC13-210ENST00000428626 TBC1D22BQ9NU19 505 aa17.61■□□□□ 0.41
SEC13-210ENST00000428626 COL1A2P08123 1366 aa17.61■□□□□ 0.41
SEC13-210ENST00000428626 C5orf42Q9H799 3197 aa17.61■□□□□ 0.41
SEC13-210ENST00000428626 MSH4O15457 936 aa17.6■□□□□ 0.41
SEC13-210ENST00000428626 ZNF862O60290 1169 aa17.6■□□□□ 0.41
SEC13-210ENST00000428626 SETQ01105 290 aaPredicted RBP17.6■□□□□ 0.41
SEC13-210ENST00000428626 DLX2Q07687 328 aaPredicted RBP17.6■□□□□ 0.41
SEC13-210ENST00000428626 HYAL1Q12794 435 aa17.6■□□□□ 0.41
SEC13-210ENST00000428626 NFX1Q12986 1120 aaKnown RBP17.6■□□□□ 0.41
SEC13-210ENST00000428626 KIZQ2M2Z5 673 aa17.6■□□□□ 0.41
SEC13-210ENST00000428626 CTC1Q2NKJ3 1217 aa17.6■□□□□ 0.41
SEC13-210ENST00000428626 RUFY3Q7L099 469 aa17.6■□□□□ 0.41
SEC13-210ENST00000428626 CMTR2Q8IYT2 770 aaKnown RBP17.6■□□□□ 0.41
SEC13-210ENST00000428626 CCDC12Q8WUD4 166 aaPredicted RBP17.6■□□□□ 0.41
SEC13-210ENST00000428626 BBXQ8WY36 941 aaPredicted RBP17.6■□□□□ 0.41
SEC13-210ENST00000428626 GABBR1Q9UBS5 961 aa17.6■□□□□ 0.41
SEC13-210ENST00000428626 PLAGL2Q9UPG8 496 aa17.6■□□□□ 0.41
SEC13-210ENST00000428626 FNDC1Q4ZHG4 1894 aaPredicted RBP17.6■□□□□ 0.41
SEC13-210ENST00000428626 GPR32O75388 356 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 REC8O95072 547 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 VTNP04004 478 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 ITGB1P05556 798 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 IBSPP21815 317 aaPredicted RBP17.59■□□□□ 0.41
SEC13-210ENST00000428626 PSMA5P28066 241 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 NPY5RQ15761 445 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 UGCGQ16739 394 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 MCTP2Q6DN12 878 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 FAM228AQ86W67 206 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 LINC01465Q8N7H1 131 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 AIFM3Q96NN9 605 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 OSMRQ99650 979 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 C1QTNF1Q9BXJ1 281 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 LMAN2LQ9H0V9 348 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 CLDND1Q9NY35 253 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 HCSTQ9UBK5 93 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 ST3GAL5Q9UNP4 418 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 RWDD3Q9Y3V2 267 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 PCDHA10Q9Y5I2 948 aa17.59■□□□□ 0.41
SEC13-210ENST00000428626 PLXNA4Q9HCM2 1894 aa17.58■□□□□ 0.41
SEC13-210ENST00000428626 LINC01565O15544 149 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 RPS6KA5O75582 802 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 MMP1P03956 469 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 IRS1P35568 1242 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 SARSP49591 514 aaKnown RBP17.58■□□□□ 0.4
SEC13-210ENST00000428626 CLCN3P51790 818 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 AKAP17AQ02040 695 aaKnown RBP17.58■□□□□ 0.4
SEC13-210ENST00000428626 EP400NLQ6ZTU2 488 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 CKAP2LQ8IYA6 745 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 SMAP1Q8IYB5 467 aaPredicted RBP17.58■□□□□ 0.4
SEC13-210ENST00000428626 KLHL23Q8NBE8 558 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 SPPL3Q8TCT6 385 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 ADAM2Q99965 735 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 LRFN3Q9BTN0 628 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 PLVAPQ9BX97 442 aa17.58■□□□□ 0.4
SEC13-210ENST00000428626 UPF3BQ9BZI7 483 aaKnown RBP17.58■□□□□ 0.4
SEC13-210ENST00000428626 FAM86C2PA6NEL3 165 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 C9IYK1 514 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 M0R2N6 131 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 DTNBO60941 627 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 PSAPP07602 524 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 FAM102BQ5T8I3 360 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 ADGRD2Q7Z7M1 963 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 GJD3Q8N144 294 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 METTL13Q8N6R0 699 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 CCDC148Q8NFR7 591 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 BICD2Q8TD16 824 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 SLC5A5Q92911 643 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 P2RX5Q93086 422 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 RGS18Q9NS28 235 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 PCDHGC5Q9Y5F6 944 aa17.57■□□□□ 0.4
SEC13-210ENST00000428626 PI4K2BG5E9Z4 385 aa17.56■□□□□ 0.4
SEC13-210ENST00000428626 TBX10O75333 385 aa17.56■□□□□ 0.4
SEC13-210ENST00000428626 TDP2O95551 362 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms