RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SQORQ9Y6N5 450 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 FNDC1Q4ZHG4 1894 aaPredicted RBP18.86■□□□□ 0.61
VARS-216ENST00000428445 PER2O15055 1255 aa18.85■□□□□ 0.61
VARS-216ENST00000428445 DHX15O43143 795 aaKnown RBP18.85■□□□□ 0.61
VARS-216ENST00000428445 NRIP1P48552 1158 aa18.85■□□□□ 0.61
VARS-216ENST00000428445 CLK2P49760 499 aaKnown RBP18.85■□□□□ 0.61
VARS-216ENST00000428445 SWSAP1Q6NVH7 229 aa18.85■□□□□ 0.61
VARS-216ENST00000428445 HFE2Q6ZVN8 426 aa18.85■□□□□ 0.61
VARS-216ENST00000428445 PLA2G4DQ86XP0 818 aa18.85■□□□□ 0.61
VARS-216ENST00000428445 RNF135Q8IUD6 432 aa18.85■□□□□ 0.61
VARS-216ENST00000428445 MSLNLQ96KJ4 702 aa18.85■□□□□ 0.61
VARS-216ENST00000428445 KLF18A0A0U1RQI7 1052 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 GOLGA8AA7E2F4 631 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 GOLGA8BA8MQT2 603 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 ZBTB42B2RXF5 422 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 GLP2RO95838 553 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 FOSP01100 380 aaPredicted RBP18.84■□□□□ 0.61
VARS-216ENST00000428445 STAG3L1P0CL83 205 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 ADD1P35611 737 aaKnown RBP18.84■□□□□ 0.61
VARS-216ENST00000428445 SREBF1P36956 1147 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 SMAD4Q13485 552 aaKnown RBP18.84■□□□□ 0.61
VARS-216ENST00000428445 SPOUT1Q5T280 376 aaKnown RBP18.84■□□□□ 0.61
VARS-216ENST00000428445 DHX32Q7L7V1 743 aaKnown RBP18.84■□□□□ 0.61
VARS-216ENST00000428445 TEX2Q8IWB9 1127 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 NME8Q8N427 588 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 ADAM2Q99965 735 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 ZNF302Q9NR11 478 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 BARHL2Q9NY43 387 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 BARX2Q9UMQ3 279 aaPredicted RBP18.84■□□□□ 0.61
VARS-216ENST00000428445 ST3GAL5Q9UNP4 418 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 PCDHB7Q9Y5E2 793 aa18.84■□□□□ 0.61
VARS-216ENST00000428445 KDM3AQ9Y4C1 1321 aa18.83■□□□□ 0.61
VARS-216ENST00000428445 TBKBP1A7MCY6 615 aa18.83■□□□□ 0.6
VARS-216ENST00000428445 HBP1O60381 514 aa18.83■□□□□ 0.6
VARS-216ENST00000428445 RPS6KA5O75582 802 aa18.83■□□□□ 0.6
VARS-216ENST00000428445 SARSP49591 514 aaKnown RBP18.83■□□□□ 0.6
VARS-216ENST00000428445 KIZQ2M2Z5 673 aa18.83■□□□□ 0.6
VARS-216ENST00000428445 PDXDC2PQ6P474 469 aa18.83■□□□□ 0.6
VARS-216ENST00000428445 ATP8B4Q8TF62 1192 aa18.83■□□□□ 0.6
VARS-216ENST00000428445 TNPO1Q92973 898 aaKnown RBP18.83■□□□□ 0.6
VARS-216ENST00000428445 FBXL18Q96ME1 805 aa18.83■□□□□ 0.6
VARS-216ENST00000428445 OSMRQ99650 979 aa18.83■□□□□ 0.6
VARS-216ENST00000428445 MYH9P35579 1960 aaKnown RBP18.82■□□□□ 0.6
VARS-216ENST00000428445 IGLV3-22A0A075B6J6 115 aa18.82■□□□□ 0.6
VARS-216ENST00000428445 VTNP04004 478 aa18.82■□□□□ 0.6
VARS-216ENST00000428445 FGFR1P11362 822 aa18.82■□□□□ 0.6
VARS-216ENST00000428445 ERVFC1P60507 584 aa18.82■□□□□ 0.6
VARS-216ENST00000428445 PPP1R18Q6NYC8 613 aa18.82■□□□□ 0.6
VARS-216ENST00000428445 EFHBQ8N7U6 833 aa18.82■□□□□ 0.6
VARS-216ENST00000428445 MICAL1Q8TDZ2 1067 aa18.82■□□□□ 0.6
VARS-216ENST00000428445 ZNF668Q96K58 619 aaPredicted RBP18.82■□□□□ 0.6
VARS-216ENST00000428445 TECTAO75443 2155 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 DENND3A2RUS2 1198 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 RPLP2P05387 115 aaKnown RBP18.81■□□□□ 0.6
VARS-216ENST00000428445 APOBRQ0VD83 1088 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 AP3B2Q13367 1082 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 NAALADL2Q58DX5 795 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 RNF20Q5VTR2 975 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 FAM160B1Q5W0V3 765 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 FAM228AQ86W67 206 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 CKAP2LQ8IYA6 745 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 METTL13Q8N6R0 699 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 VN1R2Q8NFZ6 395 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 RASGRP4Q8TDF6 673 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 UPF3BQ9BZI7 483 aaKnown RBP18.81■□□□□ 0.6
VARS-216ENST00000428445 TLE6Q9H808 572 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 RGS18Q9NS28 235 aa18.81■□□□□ 0.6
VARS-216ENST00000428445 TYW1Q9NV66 732 aaKnown RBP18.81■□□□□ 0.6
VARS-216ENST00000428445 C9IYK1 514 aa18.8■□□□□ 0.6
VARS-216ENST00000428445 IPO5O00410 1097 aaKnown RBP18.8■□□□□ 0.6
VARS-216ENST00000428445 EYA4O95677 639 aa18.8■□□□□ 0.6
VARS-216ENST00000428445 SLC26A2P50443 739 aa18.8■□□□□ 0.6
VARS-216ENST00000428445 PFKFB3Q16875 520 aaPredicted RBP18.8■□□□□ 0.6
VARS-216ENST00000428445 ZNF484Q5JVG2 852 aa18.8■□□□□ 0.6
VARS-216ENST00000428445 MIS18BP1Q6P0N0 1132 aa18.8■□□□□ 0.6
VARS-216ENST00000428445 CRYGNQ8WXF5 182 aa18.8■□□□□ 0.6
VARS-216ENST00000428445 ZNF577Q9BSK1 485 aa18.8■□□□□ 0.6
VARS-216ENST00000428445 WDR81Q562E7 1941 aa18.8■□□□□ 0.6
VARS-216ENST00000428445 GPR32O75388 356 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 FGF18O76093 207 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 C22orf31O95567 290 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 CLCN3P51790 818 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 HERC4Q5GLZ8 1057 aaPredicted RBP18.79■□□□□ 0.6
VARS-216ENST00000428445 NIPA1Q7RTP0 329 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 SMRP1Q8NCR6 262 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 APOL5Q9BWW9 433 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 CWH43Q9H720 699 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 GABBR1Q9UBS5 961 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 USP15Q9Y4E8 981 aaPredicted RBP18.79■□□□□ 0.6
VARS-216ENST00000428445 PCDHB12Q9Y5F1 795 aa18.79■□□□□ 0.6
VARS-216ENST00000428445 GPR182O15218 404 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 CYP3A4P08684 503 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 PBX3P40426 434 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 NHLH1Q02575 133 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 COASYQ13057 564 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 PKN1Q16512 942 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 TSGA10IPQ3SY00 556 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 PRR16Q569H4 304 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 LRRC55Q6ZSA7 311 aa18.78■□□□□ 0.6
VARS-216ENST00000428445 Q6ZUG5 572 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms