RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 ADAMTS5Q9UNA0 930 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 RCCD1A6NED2 376 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 SLC16A3O15427 465 aaKnown RBP18.98■□□□□ 0.63
PRDM5-203ENST00000428209 AKR1B10O60218 316 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 ATP9AO75110 1047 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 AFPP02771 609 aaKnown RBP18.98■□□□□ 0.63
PRDM5-203ENST00000428209 CASP4P49662 377 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 KIF11P52732 1056 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 DCAF17Q5H9S7 520 aaPredicted RBP18.98■□□□□ 0.63
PRDM5-203ENST00000428209 CATSPERGQ6ZRH7 1159 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 MAEAQ7L5Y9 396 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 IKZF4Q9H2S9 585 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 TCEAL9Q9UHQ7 104 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 ZNF214Q9UL59 606 aaPredicted RBP18.98■□□□□ 0.63
PRDM5-203ENST00000428209 PCDHB13Q9Y5F0 798 aa18.98■□□□□ 0.63
PRDM5-203ENST00000428209 LOXHD1Q8IVV2 1947 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 ZNF263O14978 683 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 APBA1Q02410 837 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 TMEM132BQ14DG7 1078 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 TCERG1LQ5VWI1 586 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 FBXO38Q6PIJ6 1188 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 DBR1Q9UK59 544 aaKnown RBP18.97■□□□□ 0.63
PRDM5-203ENST00000428209 ZMYM2Q9UBW7 1377 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 COL11A1P12107 1806 aaPredicted RBP18.97■□□□□ 0.63
PRDM5-203ENST00000428209 PHIPQ8WWQ0 1821 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 CCND2P30279 289 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 VAV2P52735 878 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 KIF5AQ12840 1032 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 NOL9Q5SY16 702 aaKnown RBP18.97■□□□□ 0.63
PRDM5-203ENST00000428209 SFMBT2Q5VUG0 894 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 EHBP1Q8NDI1 1231 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 AFG3L2Q9Y4W6 797 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 RLFQ13129 1914 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 UBE4BO95155 1302 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 POLR2AP24928 1970 aaKnown RBP18.97■□□□□ 0.63
PRDM5-203ENST00000428209 MYH11P35749 1972 aa18.97■□□□□ 0.63
PRDM5-203ENST00000428209 SSC5DA1L4H1 1573 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 NR3C2P08235 984 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 MAPK7Q13164 816 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 XRRA1Q6P2D8 792 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 HS2ST1Q7LGA3 356 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 VSIG10LQ86VR7 867 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 DAW1Q8N136 415 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.96■□□□□ 0.63
PRDM5-203ENST00000428209 IFIH1Q9BYX4 1025 aaKnown RBP18.96■□□□□ 0.63
PRDM5-203ENST00000428209 HOXC10Q9NYD6 342 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 PCDHA13Q9Y5I0 950 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 USP2O75604 605 aaPredicted RBP18.96■□□□□ 0.63
PRDM5-203ENST00000428209 RARRES1P49788 294 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 SLC9C1Q4G0N8 1177 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 TDRD12Q587J7 1177 aaKnown RBP18.96■□□□□ 0.63
PRDM5-203ENST00000428209 TRMT1LQ7Z2T5 733 aaKnown RBP18.96■□□□□ 0.63
PRDM5-203ENST00000428209 SYN2Q92777 582 aaPredicted RBP18.96■□□□□ 0.63
PRDM5-203ENST00000428209 CCDC43Q96MW1 224 aaKnown RBP18.96■□□□□ 0.63
PRDM5-203ENST00000428209 CCDC94Q9BW85 323 aaPredicted RBP18.96■□□□□ 0.63
PRDM5-203ENST00000428209 TEX13BQ9BXU2 312 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 DUSP10Q9Y6W6 482 aa18.96■□□□□ 0.63
PRDM5-203ENST00000428209 USO1O60763 962 aaKnown RBP18.95■□□□□ 0.62
PRDM5-203ENST00000428209 DDNO94850 711 aaPredicted RBP18.95■□□□□ 0.62
PRDM5-203ENST00000428209 LYPLA2O95372 231 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 LCA5LO95447 670 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 YWHABP31946 246 aaKnown RBP18.95■□□□□ 0.62
PRDM5-203ENST00000428209 JAK3P52333 1124 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 KRT76Q01546 638 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 PLS1Q14651 629 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 NFIL3Q16649 462 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 TEX35Q5T0J7 233 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 NSUN6Q8TEA1 469 aaKnown RBP18.95■□□□□ 0.62
PRDM5-203ENST00000428209 TSGA10Q9BZW7 698 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 GBP3Q9H0R5 595 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 LARSQ9P2J5 1176 aaKnown RBP18.95■□□□□ 0.62
PRDM5-203ENST00000428209 SSU72P8A0A1W2PR75 194 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 WDR64B1ANS9 1081 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 ATP2A1O14983 1001 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 CCNE2O96020 404 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 SFNP31947 248 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 PSMC2P35998 433 aaKnown RBP18.95■□□□□ 0.62
PRDM5-203ENST00000428209 EXOC3L4Q17RC7 722 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 HGSNATQ68CP4 663 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 SRGAP1Q7Z6B7 1085 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 CEP112Q8N8E3 955 aa18.95■□□□□ 0.62
PRDM5-203ENST00000428209 DICER1Q9UPY3 1922 aaKnown RBP18.95■□□□□ 0.62
PRDM5-203ENST00000428209 PPP1R12BO60237 982 aaPredicted RBP18.94■□□□□ 0.62
PRDM5-203ENST00000428209 TLR2O60603 784 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 SLC9A1P19634 815 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 PSMC5P62195 406 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 MAPK8IP2Q13387 824 aaPredicted RBP18.94■□□□□ 0.62
PRDM5-203ENST00000428209 UGCGQ16739 394 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 RSRC2Q7L4I2 434 aaKnown RBP18.94■□□□□ 0.62
PRDM5-203ENST00000428209 NLRX1Q86UT6 975 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 C4orf19Q8IY42 314 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 FAM186BQ8IYM0 893 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 SYCP3Q8IZU3 236 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 GOLGA1Q92805 767 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 SLC35C1Q96A29 364 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 SH2D3AQ9BRG2 576 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 GANQ9H2C0 597 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 ACAD9Q9H845 621 aa18.94■□□□□ 0.62
PRDM5-203ENST00000428209 PUF60Q9UHX1 559 aaKnown RBP18.94■□□□□ 0.62
PRDM5-203ENST00000428209 MYO6Q9UM54 1294 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms