RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PIK3AP1Q6ZUJ8 805 aa20.79■□□□□ 0.92
GPC1-205ENST00000427506 NEK8Q86SG6 692 aa20.79■□□□□ 0.92
GPC1-205ENST00000427506 KIAA0319LQ8IZA0 1049 aa20.79■□□□□ 0.92
GPC1-205ENST00000427506 GDPD5Q8WTR4 605 aa20.79■□□□□ 0.92
GPC1-205ENST00000427506 BRMS1Q9HCU9 246 aa20.79■□□□□ 0.92
GPC1-205ENST00000427506 C22orf31O95567 290 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 OATP04181 439 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 PRKCEQ02156 737 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 KRT40Q6A162 431 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 SP7Q8TDD2 431 aaPredicted RBP20.78■□□□□ 0.92
GPC1-205ENST00000427506 OXER1Q8TDS5 423 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 MBOAT7Q96N66 472 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 C17orf80Q9BSJ5 609 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 FTHL17Q9BXU8 183 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 SUGCTQ9HAC7 445 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 THEGQ9P2T0 379 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 PADI3Q9ULW8 664 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 KDM3AQ9Y4C1 1321 aa20.78■□□□□ 0.92
GPC1-205ENST00000427506 SIP14410 1827 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 MAGEB2O15479 319 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 ZNF862O60290 1169 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 MARCH6O60337 910 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 CCNT1O60563 726 aaKnown RBP20.77■□□□□ 0.92
GPC1-205ENST00000427506 FDPSP14324 419 aaKnown RBP20.77■□□□□ 0.92
GPC1-205ENST00000427506 KRT2P35908 639 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 NFX1Q12986 1120 aaKnown RBP20.77■□□□□ 0.92
GPC1-205ENST00000427506 NSUN7Q8NE18 718 aaKnown RBP20.77■□□□□ 0.92
GPC1-205ENST00000427506 FBXO22Q8NEZ5 403 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 RDM1Q8NG50 284 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 ETNPPLQ8TBG4 499 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 PPP1R16BQ96T49 567 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 COL25A1Q9BXS0 654 aaPredicted RBP20.77■□□□□ 0.92
GPC1-205ENST00000427506 MYO9BQ13459 2157 aa20.77■□□□□ 0.92
GPC1-205ENST00000427506 SLC37A4O43826 429 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 LPXNO60711 386 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 RPS6KA5O75582 802 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 GCFC2P16383 781 aaKnown RBP20.76■□□□□ 0.91
GPC1-205ENST00000427506 TMOD1P28289 359 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 FOSBP53539 338 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 TRIM29Q14134 588 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 UGCGQ16739 394 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 TMEM266Q2M3C6 531 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 SAMD11Q96NU1 681 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 NAP1L4Q99733 375 aaKnown RBP20.76■□□□□ 0.91
GPC1-205ENST00000427506 CDHR5Q9HBB8 845 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 AKT3Q9Y243 479 aa20.76■□□□□ 0.91
GPC1-205ENST00000427506 JAK2O60674 1132 aa20.75■□□□□ 0.91
GPC1-205ENST00000427506 VTNP04004 478 aa20.75■□□□□ 0.91
GPC1-205ENST00000427506 KIZQ2M2Z5 673 aa20.75■□□□□ 0.91
GPC1-205ENST00000427506 ODR4Q5SWX8 454 aa20.75■□□□□ 0.91
GPC1-205ENST00000427506 PPP4R3AQ6IN85 833 aa20.75■□□□□ 0.91
GPC1-205ENST00000427506 EFCAB12Q6NXP0 572 aa20.75■□□□□ 0.91
GPC1-205ENST00000427506 FIBCD1Q8N539 461 aa20.75■□□□□ 0.91
GPC1-205ENST00000427506 ATXN2LQ8WWM7 1075 aaKnown RBP20.75■□□□□ 0.91
GPC1-205ENST00000427506 MAP7D2Q96T17 732 aa20.75■□□□□ 0.91
GPC1-205ENST00000427506 IBSPP21815 317 aaPredicted RBP20.74■□□□□ 0.91
GPC1-205ENST00000427506 CLCN3P51790 818 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 CRYBB1P53674 252 aaPredicted RBP20.74■□□□□ 0.91
GPC1-205ENST00000427506 NR5A1Q13285 461 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 EPC2Q52LR7 807 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 TJAP1Q5JTD0 557 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 LRRC71Q8N4P6 559 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 LINC01599Q8WXQ3 324 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 SYMPKQ92797 1274 aaKnown RBP20.74■□□□□ 0.91
GPC1-205ENST00000427506 FAM20AQ96MK3 541 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 OSMRQ99650 979 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 LMCD1Q9NZU5 365 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 SEPT9Q9UHD8 586 aaPredicted RBP20.74■□□□□ 0.91
GPC1-205ENST00000427506 LIMCH1Q9UPQ0 1083 aa20.74■□□□□ 0.91
GPC1-205ENST00000427506 NOC2LQ9Y3T9 749 aaKnown RBP20.74■□□□□ 0.91
GPC1-205ENST00000427506 GPR182O15218 404 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 STAG3L1P0CL83 205 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 MRPS5P82675 430 aaKnown RBP20.73■□□□□ 0.91
GPC1-205ENST00000427506 TBC1D8BQ0IIM8 1120 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 C8orf34Q49A92 452 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 XKR3Q5GH77 459 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 B3GNT9Q6UX72 402 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 RTN4RL1Q86UN2 441 aaPredicted RBP20.73■□□□□ 0.91
GPC1-205ENST00000427506 TMEM192Q8IY95 271 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 BANK1Q8NDB2 785 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 TMEM40Q8WWA1 233 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 ERVK-5Q9HDB9 667 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 MYH9P35579 1960 aaKnown RBP20.73■□□□□ 0.91
GPC1-205ENST00000427506 ADGRA3Q8IWK6 1321 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 EYSQ5T1H1 3165 aa20.73■□□□□ 0.91
GPC1-205ENST00000427506 CHD7Q9P2D1 2997 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 DENND3A2RUS2 1198 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 DDX11L8A8MPP1 907 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 BAG4O95429 457 aaKnown RBP20.72■□□□□ 0.91
GPC1-205ENST00000427506 MMP1P03956 469 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 NLRP11P59045 1033 aaKnown RBP20.72■□□□□ 0.91
GPC1-205ENST00000427506 BTG3Q14201 252 aaPredicted RBP20.72■□□□□ 0.91
GPC1-205ENST00000427506 MTERF2Q49AM1 385 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 EARS2Q5JPH6 523 aaKnown RBP20.72■□□□□ 0.91
GPC1-205ENST00000427506 NPAS4Q8IUM7 802 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 IL27Q8NEV9 243 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 TMX1Q9H3N1 280 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 KCNMB3Q9NPA1 279 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 LRFN2Q9ULH4 789 aa20.72■□□□□ 0.91
GPC1-205ENST00000427506 ST3GAL5Q9UNP4 418 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms