RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 CCDC85BQ15834 202 aaPredicted RBP12.14□□□□□ -0.47
LINC01238-202ENST00000426962 B3GNT9Q6UX72 402 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 FAM43BQ6ZT52 329 aaPredicted RBP12.14□□□□□ -0.47
LINC01238-202ENST00000426962 PIK3AP1Q6ZUJ8 805 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 MIER3Q7Z3K6 550 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 METTL13Q8N6R0 699 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 ETNPPLQ8TBG4 499 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 FAM20AQ96MK3 541 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 YME1L1Q96TA2 773 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 FTHL17Q9BXU8 183 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 IGSF9BQ9UPX0 1349 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 TBX3O15119 743 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 SLC37A4O43826 429 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 ZNF862O60290 1169 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 JAK2O60674 1132 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 C22orf31O95567 290 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 OATP04181 439 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 TMOD1P28289 359 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 ODR4Q5SWX8 454 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 EFCAB12Q6NXP0 572 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 RTN4RL1Q86UN2 441 aaPredicted RBP12.13□□□□□ -0.47
LINC01238-202ENST00000426962 ZNF710Q8N1W2 664 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
LINC01238-202ENST00000426962 ZSCAN31Q96LW9 406 aaPredicted RBP12.13□□□□□ -0.47
LINC01238-202ENST00000426962 KIF2CQ99661 725 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 KCNMB3Q9NPA1 279 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 PADI3Q9ULW8 664 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 MTCH2Q9Y6C9 303 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 MYO9BQ13459 2157 aa12.13□□□□□ -0.47
LINC01238-202ENST00000426962 CHD7Q9P2D1 2997 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 DLL1O00548 723 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 MARCH6O60337 910 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 RPS6KA5O75582 802 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 MMP1P03956 469 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 CRYBB1P53674 252 aaPredicted RBP12.12□□□□□ -0.47
LINC01238-202ENST00000426962 PRKCEQ02156 737 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 PAK2Q13177 524 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 NR5A1Q13285 461 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 GRB10Q13322 594 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 PPP2R5CQ13362 524 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 TRIM29Q14134 588 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 UGCGQ16739 394 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 XKR3Q5GH77 459 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 EARS2Q5JPH6 523 aaKnown RBP12.12□□□□□ -0.47
LINC01238-202ENST00000426962 SPRED2Q7Z698 418 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 TNFRSF25Q93038 417 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 SAMD11Q96NU1 681 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 LLPHQ9BRT6 129 aaKnown RBP12.12□□□□□ -0.47
LINC01238-202ENST00000426962 NIFKQ9BYG3 293 aaKnown RBP12.12□□□□□ -0.47
LINC01238-202ENST00000426962 SUGCTQ9HAC7 445 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 CDHR5Q9HBB8 845 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 LMCD1Q9NZU5 365 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 GINS2Q9Y248 185 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 A0A0C4DFX4 3053 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 PRUNE2Q8WUY3 3088 aa12.12□□□□□ -0.47
LINC01238-202ENST00000426962 BTBD18B2RXH4 712 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 GPR182O15218 404 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 LPXNO60711 386 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 GPR32O75388 356 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 BAG4O95429 457 aaKnown RBP12.11□□□□□ -0.47
LINC01238-202ENST00000426962 VTNP04004 478 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 RBM25P49756 843 aaKnown RBP12.11□□□□□ -0.47
LINC01238-202ENST00000426962 ST3GAL1Q11201 340 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 NFX1Q12986 1120 aaKnown RBP12.11□□□□□ -0.47
LINC01238-202ENST00000426962 TARBP2Q15633 366 aaKnown RBP12.11□□□□□ -0.47
LINC01238-202ENST00000426962 KRT40Q6A162 431 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 CCDC83Q8IWF9 413 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 SLFN12Q8IYM2 578 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 HAS1Q92839 578 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 C17orf80Q9BSJ5 609 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
LINC01238-202ENST00000426962 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
LINC01238-202ENST00000426962 MTUS1Q9ULD2 1270 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 NOC2LQ9Y3T9 749 aaKnown RBP12.11□□□□□ -0.47
LINC01238-202ENST00000426962 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
LINC01238-202ENST00000426962 MICAL3Q7RTP6 2002 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 DDX11L8A8MPP1 907 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 EML1O00423 815 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 DKC1O60832 514 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC01238-202ENST00000426962 STBD1O95210 358 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
LINC01238-202ENST00000426962 STAG3L1P0CL83 205 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 CLCN3P51790 818 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 NLRP11P59045 1033 aaKnown RBP12.1□□□□□ -0.47
LINC01238-202ENST00000426962 PSMC5P62195 406 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 CDC42EP1Q00587 391 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 TBC1D8BQ0IIM8 1120 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 KIZQ2M2Z5 673 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 TMEM266Q2M3C6 531 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 EPC2Q52LR7 807 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 TMEM192Q8IY95 271 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
LINC01238-202ENST00000426962 CRIPAKQ8N1N5 446 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 MICALL1Q8N3F8 863 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 LRRC71Q8N4P6 559 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 FIBCD1Q8N539 461 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 LINC01465Q8N7H1 131 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 BANK1Q8NDB2 785 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 FBXO22Q8NEZ5 403 aa12.1□□□□□ -0.47
LINC01238-202ENST00000426962 TMEM40Q8WWA1 233 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms