RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 MYBL2P10244 700 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 NF2P35240 595 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 USP11P51784 963 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 BACE1P56817 501 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 CREG2Q8IUH2 290 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 OSBPL9Q96SU4 736 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 GLT8D2Q9H1C3 349 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 AS3MTQ9HBK9 375 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 CEP72Q9P209 647 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 SOCS7O14512 581 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 NOL4O94818 638 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 CASP5P51878 434 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 ARSHQ5FYA8 562 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 HAUS3Q68CZ6 603 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 CATSPER3Q86XQ3 398 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 SLFN12Q8IYM2 578 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 HDAC7Q8WUI4 952 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 TBC1D5Q92609 795 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 EXOC4Q96A65 974 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 CEP63Q96MT8 703 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 NOX5Q96PH1 765 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 CALCOCO1Q9P1Z2 691 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 CTDP1Q9Y5B0 961 aaPredicted RBP11.72□□□□□ -0.53
CUX1-205ENST00000425244 PCDHA2Q9Y5H9 948 aa11.72□□□□□ -0.53
CUX1-205ENST00000425244 TARSL2A2RTX5 802 aaKnown RBP11.71□□□□□ -0.53
CUX1-205ENST00000425244 TLR2O60603 784 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 NR2F2P24468 414 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 ZNF76P36508 570 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 SLC7A5Q01650 507 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 HYIQ5T013 277 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 HGSNATQ68CP4 663 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 FAM133AQ8N9E0 248 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 ERMNQ8TAM6 284 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 WNK4Q96J92 1243 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 FEM1BQ9UK73 627 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 HYOU1Q9Y4L1 999 aa11.71□□□□□ -0.53
CUX1-205ENST00000425244 MYH10P35580 1976 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 CETN3O15182 167 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 LCA5LO95447 670 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 SLC12A3P55017 1021 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 UBXN2AP68543 259 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 BTNL9Q6UXG8 535 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 SFR1Q86XK3 245 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 TRIM59Q8IWR1 403 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 CYP2W1Q8TAV3 490 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 LRRC1Q9BTT6 524 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 KCTD10Q9H3F6 313 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 RAVER2Q9HCJ3 691 aaKnown RBP11.71□□□□□ -0.54
CUX1-205ENST00000425244 DNM3Q9UQ16 869 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 SNCAIPQ9Y6H5 919 aa11.71□□□□□ -0.54
CUX1-205ENST00000425244 FAM86B1E9PN63 330 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 WDR46O15213 610 aaKnown RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 GNA14O95837 355 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 SERPING1P05155 500 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 FAM86B2P0C5J1 330 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 ACTN1P12814 892 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 CAPN2P17655 700 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 IREB2P48200 963 aaKnown RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 DCAF17Q5H9S7 520 aaPredicted RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 SLC30A10Q6XR72 485 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 PRPF38AQ8NAV1 312 aaKnown RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 SPATA4Q8NEY3 305 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 ETNPPLQ8TBG4 499 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 FAM71BQ8TC56 605 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 RIN2Q8WYP3 895 aaPredicted RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 LPAR1Q92633 364 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 REEP2Q9BRK0 252 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 SELENOOQ9BVL4 669 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 PLEKHA4Q9H4M7 779 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 CCPG1Q9ULG6 757 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 SYNPO2Q9UMS6 1093 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 DOCK1Q14185 1865 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 PRPF6O94906 941 aaKnown RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 ALAS1P13196 640 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 KLHL30Q0D2K2 578 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 KCNH2Q12809 1159 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 AP3B2Q13367 1082 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 ZSCAN26Q16670 478 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 ASTE1Q2TB18 679 aaPredicted RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 CCNI2Q6ZMN8 369 aaPredicted RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 PNMA8AQ86V59 439 aaPredicted RBP11.7□□□□□ -0.54
CUX1-205ENST00000425244 LDHDQ86WU2 507 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 MS4A14Q96JA4 679 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 EDEM3Q9BZQ6 932 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 HPCAL4Q9UM19 191 aa11.7□□□□□ -0.54
CUX1-205ENST00000425244 CYP3A7-CYP3A51PA0A087WV96 503 aa11.69□□□□□ -0.54
CUX1-205ENST00000425244 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
CUX1-205ENST00000425244 RSPH10B2B2RC85 870 aa11.69□□□□□ -0.54
CUX1-205ENST00000425244 PEX10O60683 326 aa11.69□□□□□ -0.54
CUX1-205ENST00000425244 RNF40O75150 1001 aa11.69□□□□□ -0.54
CUX1-205ENST00000425244 FTCDO95954 541 aa11.69□□□□□ -0.54
CUX1-205ENST00000425244 MYCNP04198 464 aaPredicted RBP11.69□□□□□ -0.54
CUX1-205ENST00000425244 RSPH10BP0C881 870 aa11.69□□□□□ -0.54
CUX1-205ENST00000425244 MYBP10242 640 aa11.69□□□□□ -0.54
CUX1-205ENST00000425244 TCP1P17987 556 aaKnown RBP11.69□□□□□ -0.54
CUX1-205ENST00000425244 CYP3A7P24462 503 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms