RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 YME1L1Q96TA2 773 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 COL4A4P53420 1690 aaPredicted RBP24.34■■□□□ 1.49
CDCP1-202ENST00000425231 ZNF862O60290 1169 aa24.34■■□□□ 1.49
CDCP1-202ENST00000425231 FDPSP14324 419 aaKnown RBP24.34■■□□□ 1.49
CDCP1-202ENST00000425231 INF2Q27J81 1249 aa24.34■■□□□ 1.49
CDCP1-202ENST00000425231 TRMT1LQ7Z2T5 733 aaKnown RBP24.34■■□□□ 1.49
CDCP1-202ENST00000425231 RTN4RL1Q86UN2 441 aaPredicted RBP24.34■■□□□ 1.49
CDCP1-202ENST00000425231 GDPD5Q8WTR4 605 aa24.34■■□□□ 1.49
CDCP1-202ENST00000425231 C17orf80Q9BSJ5 609 aa24.34■■□□□ 1.49
CDCP1-202ENST00000425231 TEKT3Q9BXF9 490 aa24.34■■□□□ 1.49
CDCP1-202ENST00000425231 UNC45AQ9H3U1 944 aa24.34■■□□□ 1.49
CDCP1-202ENST00000425231 ORC3Q9UBD5 711 aaPredicted RBP24.34■■□□□ 1.49
CDCP1-202ENST00000425231 C22orf31O95567 290 aa24.33■■□□□ 1.49
CDCP1-202ENST00000425231 XBP1P17861 261 aa24.33■■□□□ 1.49
CDCP1-202ENST00000425231 NEK4P51957 841 aa24.33■■□□□ 1.49
CDCP1-202ENST00000425231 B3GNT9Q6UX72 402 aa24.33■■□□□ 1.49
CDCP1-202ENST00000425231 ETNPPLQ8TBG4 499 aa24.33■■□□□ 1.49
CDCP1-202ENST00000425231 ATXN2LQ8WWM7 1075 aaKnown RBP24.33■■□□□ 1.49
CDCP1-202ENST00000425231 LINC01599Q8WXQ3 324 aa24.33■■□□□ 1.49
CDCP1-202ENST00000425231 CDHR5Q9HBB8 845 aa24.33■■□□□ 1.49
CDCP1-202ENST00000425231 THEGQ9P2T0 379 aa24.33■■□□□ 1.49
CDCP1-202ENST00000425231 PADI3Q9ULW8 664 aa24.33■■□□□ 1.49
CDCP1-202ENST00000425231 COL4A6Q14031 1691 aa24.32■■□□□ 1.48
CDCP1-202ENST00000425231 TTC3P53804 2025 aa24.32■■□□□ 1.48
CDCP1-202ENST00000425231 SFNP31947 248 aa24.32■■□□□ 1.48
CDCP1-202ENST00000425231 OXER1Q8TDS5 423 aa24.32■■□□□ 1.48
CDCP1-202ENST00000425231 GTF3C6Q969F1 213 aa24.32■■□□□ 1.48
CDCP1-202ENST00000425231 LMCD1Q9NZU5 365 aa24.32■■□□□ 1.48
CDCP1-202ENST00000425231 SPTBN5Q9NRC6 3674 aaKnown RBP24.32■■□□□ 1.48
CDCP1-202ENST00000425231 CHMP2AO43633 222 aa24.31■■□□□ 1.48
CDCP1-202ENST00000425231 JAK3P52333 1124 aa24.31■■□□□ 1.48
CDCP1-202ENST00000425231 UGCGQ16739 394 aa24.31■■□□□ 1.48
CDCP1-202ENST00000425231 CRIPAKQ8N1N5 446 aa24.31■■□□□ 1.48
CDCP1-202ENST00000425231 FAM167AQ96KS9 214 aa24.31■■□□□ 1.48
CDCP1-202ENST00000425231 FTHL17Q9BXU8 183 aa24.31■■□□□ 1.48
CDCP1-202ENST00000425231 CEP131Q9UPN4 1083 aa24.31■■□□□ 1.48
CDCP1-202ENST00000425231 TJAP1Q5JTD0 557 aa24.3■■□□□ 1.48
CDCP1-202ENST00000425231 RDM1Q8NG50 284 aa24.3■■□□□ 1.48
CDCP1-202ENST00000425231 RC3H2Q9HBD1 1191 aaKnown RBP24.3■■□□□ 1.48
CDCP1-202ENST00000425231 DDX25Q9UHL0 483 aaKnown RBP24.3■■□□□ 1.48
CDCP1-202ENST00000425231 CCDC194A0A1B0GVG4 234 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 SLC37A4O43826 429 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 OATP04181 439 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 PAK2Q13177 524 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 LETM2Q2VYF4 491 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 EPC2Q52LR7 807 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 FBXO22Q8NEZ5 403 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 TMEM40Q8WWA1 233 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 WASF1Q92558 559 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 SAMD11Q96NU1 681 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 ASB2Q96Q27 587 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 TMX1Q9H3N1 280 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 NRBP2Q9NSY0 501 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 GINS2Q9Y248 185 aa24.29■■□□□ 1.48
CDCP1-202ENST00000425231 MAGEB2O15479 319 aa24.28■■□□□ 1.48
CDCP1-202ENST00000425231 PRKCEQ02156 737 aa24.28■■□□□ 1.48
CDCP1-202ENST00000425231 TMEM266Q2M3C6 531 aa24.28■■□□□ 1.48
CDCP1-202ENST00000425231 EARS2Q5JPH6 523 aaKnown RBP24.28■■□□□ 1.48
CDCP1-202ENST00000425231 PPP4R3AQ6IN85 833 aa24.28■■□□□ 1.48
CDCP1-202ENST00000425231 MIER3Q7Z3K6 550 aa24.28■■□□□ 1.48
CDCP1-202ENST00000425231 NEK8Q86SG6 692 aa24.28■■□□□ 1.48
CDCP1-202ENST00000425231 METTL13Q8N6R0 699 aa24.28■■□□□ 1.48
CDCP1-202ENST00000425231 LINC01465Q8N7H1 131 aa24.28■■□□□ 1.48
CDCP1-202ENST00000425231 NSUN7Q8NE18 718 aaKnown RBP24.28■■□□□ 1.48
CDCP1-202ENST00000425231 ZNF689Q96CS4 500 aaPredicted RBP24.28■■□□□ 1.48
CDCP1-202ENST00000425231 TSPYL2Q9H2G4 693 aaPredicted RBP24.28■■□□□ 1.48
CDCP1-202ENST00000425231 NOC2LQ9Y3T9 749 aaKnown RBP24.28■■□□□ 1.48
CDCP1-202ENST00000425231 GPR32O75388 356 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 LINC00271P0C7V0 271 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 MRPS5P82675 430 aaKnown RBP24.27■■□□□ 1.48
CDCP1-202ENST00000425231 PIK3AP1Q6ZUJ8 805 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 TMEM192Q8IY95 271 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 SYMPKQ92797 1274 aaKnown RBP24.27■■□□□ 1.48
CDCP1-202ENST00000425231 ERVK-5Q9HDB9 667 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 KCNMB3Q9NPA1 279 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 DGKIO75912 1065 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 STBD1O95210 358 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 VTNP04004 478 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 ST3GAL1Q11201 340 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 NFX1Q12986 1120 aaKnown RBP24.27■■□□□ 1.48
CDCP1-202ENST00000425231 SKIV2LQ15477 1246 aaKnown RBP24.27■■□□□ 1.48
CDCP1-202ENST00000425231 KIZQ2M2Z5 673 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 EFCAB12Q6NXP0 572 aa24.27■■□□□ 1.48
CDCP1-202ENST00000425231 NLRC5Q86WI3 1866 aa24.26■■□□□ 1.47
CDCP1-202ENST00000425231 RPS6KA5O75582 802 aa24.26■■□□□ 1.47
CDCP1-202ENST00000425231 GCFC2P16383 781 aaKnown RBP24.26■■□□□ 1.47
CDCP1-202ENST00000425231 CLCN3P51790 818 aa24.26■■□□□ 1.47
CDCP1-202ENST00000425231 CRYBB1P53674 252 aaPredicted RBP24.26■■□□□ 1.47
CDCP1-202ENST00000425231 NR5A1Q13285 461 aa24.26■■□□□ 1.47
CDCP1-202ENST00000425231 TARBP2Q15633 366 aaKnown RBP24.26■■□□□ 1.47
CDCP1-202ENST00000425231 FIBCD1Q8N539 461 aa24.26■■□□□ 1.47
CDCP1-202ENST00000425231 TNFRSF25Q93038 417 aa24.26■■□□□ 1.47
CDCP1-202ENST00000425231 FAM20AQ96MK3 541 aa24.26■■□□□ 1.47
CDCP1-202ENST00000425231 PPP1R16BQ96T49 567 aa24.26■■□□□ 1.47
CDCP1-202ENST00000425231 ADGRA3Q8IWK6 1321 aa24.25■■□□□ 1.47
CDCP1-202ENST00000425231 H3BNC9 293 aa24.25■■□□□ 1.47
CDCP1-202ENST00000425231 MGEA5O60502 916 aa24.25■■□□□ 1.47
CDCP1-202ENST00000425231 JAK2O60674 1132 aa24.25■■□□□ 1.47
CDCP1-202ENST00000425231 TFF2Q03403 129 aa24.25■■□□□ 1.47
CDCP1-202ENST00000425231 C8orf34Q49A92 452 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms