RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ERVK-5Q9HDB9 667 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 ALG13Q9NP73 1137 aaKnown RBP14.75□□□□□ -0.05
VRK3-203ENST00000424804 PLXNA4Q9HCM2 1894 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 FAM86C2PA6NEL3 165 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 DDX39AO00148 427 aaKnown RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 HBP1O60381 514 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 EIF5BO60841 1220 aaKnown RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 MMP1P03956 469 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 RPLP2P05387 115 aaKnown RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 ITGB1P05556 798 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 SCG2P13521 617 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 SLC26A2P50443 739 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 AKAP17AQ02040 695 aaKnown RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 TOB2Q14106 344 aaPredicted RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 BTG3Q14201 252 aaPredicted RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 TMEM266Q2M3C6 531 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 TMEM31Q5JXX7 168 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 PLA2G4DQ86XP0 818 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 NPAS4Q8IUM7 802 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 CMTR2Q8IYT2 770 aaKnown RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 ATP8B4Q8TF62 1192 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 P2RX5Q93086 422 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 PHKBQ93100 1093 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 LENG9Q96B70 501 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 C11orf84Q9BUA3 381 aaPredicted RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 PLVAPQ9BX97 442 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 FTHL17Q9BXU8 183 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 TM6SF1Q9BZW5 370 aa14.74□□□□□ -0.05
VRK3-203ENST00000424804 NOC2LQ9Y3T9 749 aaKnown RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 MAFBQ9Y5Q3 323 aaPredicted RBP14.74□□□□□ -0.05
VRK3-203ENST00000424804 LINC01565O15544 149 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 PRPF3O43395 683 aaKnown RBP14.73□□□□□ -0.05
VRK3-203ENST00000424804 CIITAP33076 1130 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 IRS1P35568 1242 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 PLA2G5P39877 138 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 KRT76Q01546 638 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 ZP2Q05996 745 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 ADAM15Q13444 863 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 PUS10Q3MIT2 529 aaKnown RBP14.73□□□□□ -0.05
VRK3-203ENST00000424804 SWSAP1Q6NVH7 229 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 LINC01465Q8N7H1 131 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 GLT8D2Q9H1C3 349 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 RWDD3Q9Y3V2 267 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 COL1A2P08123 1366 aa14.73□□□□□ -0.05
VRK3-203ENST00000424804 IPO5O00410 1097 aaKnown RBP14.72□□□□□ -0.05
VRK3-203ENST00000424804 CPLX1O14810 134 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 TBX10O75333 385 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 GPR32O75388 356 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 C22orf31O95567 290 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 PDIA3P30101 505 aaKnown RBP14.72□□□□□ -0.05
VRK3-203ENST00000424804 EVCP57679 992 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 FAM189BP81408 668 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 ZNF484Q5JVG2 852 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 ADGRD2Q7Z7M1 963 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 KLHL23Q8NBE8 558 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 RASGRP4Q8TDF6 673 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 TNPO1Q92973 898 aaKnown RBP14.72□□□□□ -0.05
VRK3-203ENST00000424804 MSLNLQ96KJ4 702 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 SLC26A6Q9BXS9 759 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 ZNF302Q9NR11 478 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 CLDND1Q9NY35 253 aa14.72□□□□□ -0.05
VRK3-203ENST00000424804 ARIH1Q9Y4X5 557 aaPredicted RBP14.72□□□□□ -0.05
VRK3-203ENST00000424804 C9IYK1 514 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 MBTPS2O43462 519 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 ZNF76P36508 570 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 SARSP49591 514 aaKnown RBP14.71□□□□□ -0.05
VRK3-203ENST00000424804 PAK2Q13177 524 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 DSC3Q14574 896 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 NAALADL2Q58DX5 795 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 ZNF746Q6NUN9 644 aaPredicted RBP14.71□□□□□ -0.05
VRK3-203ENST00000424804 PDXDC2PQ6P474 469 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 FAM228AQ86W67 206 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 RGS18Q9NS28 235 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 CLEC1BQ9P126 229 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 HCSTQ9UBK5 93 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 ST3GAL5Q9UNP4 418 aa14.71□□□□□ -0.05
VRK3-203ENST00000424804 MUC6Q6W4X9 2439 aa14.71□□□□□ -0.06
VRK3-203ENST00000424804 BACH1O14867 736 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 NCK2O43639 380 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 ZNF862O60290 1169 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 ANAPC15P60006 121 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 SMAD2Q15796 467 aaKnown RBP14.7□□□□□ -0.06
VRK3-203ENST00000424804 PAN2Q504Q3 1202 aaKnown RBP14.7□□□□□ -0.06
VRK3-203ENST00000424804 FAM102BQ5T8I3 360 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 FAM160B1Q5W0V3 765 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 MIS18BP1Q6P0N0 1132 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 ZNF577Q9BSK1 485 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 TBC1D22BQ9NU19 505 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 RNF19AQ9NV58 838 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 PRKAG3Q9UGI9 489 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 PCDHGC5Q9Y5F6 944 aa14.7□□□□□ -0.06
VRK3-203ENST00000424804 TECTAO75443 2155 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 M0QZ92 97 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 RPS6KA5O75582 802 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 GLP2RO95838 553 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 STAG3L1P0CL83 205 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 IFNAR1P17181 557 aa14.69□□□□□ -0.06
VRK3-203ENST00000424804 CRYBB1P53674 252 aaPredicted RBP14.69□□□□□ -0.06
VRK3-203ENST00000424804 SSRP1Q08945 709 aaKnown RBP14.69□□□□□ -0.06
VRK3-203ENST00000424804 NFX1Q12986 1120 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms