RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 ZNF571Q7Z3V5 609 aaPredicted RBP13.09□□□□□ -0.31
PTPRN-204ENST00000423636 TRIM59Q8IWR1 403 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
PTPRN-204ENST00000423636 EIF3CQ99613 913 aaKnown RBP13.09□□□□□ -0.31
PTPRN-204ENST00000423636 MKI67P46013 3256 aaKnown RBP13.09□□□□□ -0.31
PTPRN-204ENST00000423636 HIP1RO75146 1068 aa13.08□□□□□ -0.31
PTPRN-204ENST00000423636 CYP3A4P08684 503 aa13.08□□□□□ -0.31
PTPRN-204ENST00000423636 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.31
PTPRN-204ENST00000423636 AP3B2Q13367 1082 aa13.08□□□□□ -0.31
PTPRN-204ENST00000423636 TAF3Q5VWG9 929 aa13.08□□□□□ -0.31
PTPRN-204ENST00000423636 KAT5Q92993 513 aa13.08□□□□□ -0.31
PTPRN-204ENST00000423636 SAAL1Q96ER3 474 aa13.08□□□□□ -0.31
PTPRN-204ENST00000423636 AP1M1Q9BXS5 423 aa13.08□□□□□ -0.31
PTPRN-204ENST00000423636 TCEAL9Q9UHQ7 104 aa13.08□□□□□ -0.31
PTPRN-204ENST00000423636 FAN1Q9Y2M0 1017 aa13.08□□□□□ -0.31
PTPRN-204ENST00000423636 ARHGEF35A5YM69 484 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 TMEM110-MUSTN1A8MSY1 372 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 SLC16A4O15374 487 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 LMAN1P49257 510 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 ITGB3BPQ13352 177 aaPredicted RBP13.08□□□□□ -0.32
PTPRN-204ENST00000423636 C2CD6Q53TS8 623 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.32
PTPRN-204ENST00000423636 CIAPIN1Q6FI81 312 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 PALB2Q86YC2 1186 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 U2AF1L4Q8WU68 220 aaKnown RBP13.08□□□□□ -0.32
PTPRN-204ENST00000423636 GMLQ99445 158 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 CBWD1Q9BRT8 395 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 HACL1Q9UJ83 578 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 PRDM4Q9UKN5 801 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 CCDC169A6NNP5 214 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 K7ENM7 598 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 EXOC3O60645 756 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 PON1P27169 355 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 FSTL1Q12841 308 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 SLC9C1Q4G0N8 1177 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 MIER3Q7Z3K6 550 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 DEFB129Q9H1M3 183 aa13.08□□□□□ -0.32
PTPRN-204ENST00000423636 TACC1O75410 805 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
PTPRN-204ENST00000423636 UCHL3P15374 230 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 FECHP22830 423 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 GCLMP48507 274 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 GUCY2FP51841 1108 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 PRELPP51888 382 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 ASIC2Q16515 512 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 EPC2Q52LR7 807 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 GLYCTKQ8IVS8 523 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 CHURC1Q8WUH1 139 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 HSD17B14Q9BPX1 270 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
PTPRN-204ENST00000423636 RBM12Q9NTZ6 932 aaKnown RBP13.07□□□□□ -0.32
PTPRN-204ENST00000423636 ZHX2Q9Y6X8 837 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 PSMD10O75832 226 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 PEX3P56589 373 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 MRPS9P82933 396 aaKnown RBP13.07□□□□□ -0.32
PTPRN-204ENST00000423636 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
PTPRN-204ENST00000423636 CASP8Q14790 479 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 FAM102BQ5T8I3 360 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 CYFIP1Q7L576 1253 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 WRNIP1Q96S55 665 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 R3HDMLQ9H3Y0 253 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 OSGEPQ9NPF4 335 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 TAS2R14Q9NYV8 317 aa13.07□□□□□ -0.32
PTPRN-204ENST00000423636 HERC5Q9UII4 1024 aaKnown RBP13.07□□□□□ -0.32
PTPRN-204ENST00000423636 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-204ENST00000423636 Q4G0T1 1027 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 FAM186BQ8IYM0 893 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 OSBPL9Q96SU4 736 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 TRIM31Q9BZY9 425 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 CNOT7Q9UIV1 285 aaKnown RBP13.06□□□□□ -0.32
PTPRN-204ENST00000423636 ZNF536O15090 1300 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 CYP3A7-CYP3A51PA0A087WV96 503 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 CYP3A7P24462 503 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
PTPRN-204ENST00000423636 SF3A3Q12874 501 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPRN-204ENST00000423636 BAATQ14032 418 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-204ENST00000423636 SEZ6Q53EL9 994 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
PTPRN-204ENST00000423636 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 RMDN3Q96TC7 470 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 TAOK3Q9H2K8 898 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 PARVGQ9HBI0 331 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-204ENST00000423636 PIM2Q9P1W9 311 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 AFPP02771 609 aaKnown RBP13.06□□□□□ -0.32
PTPRN-204ENST00000423636 HARSP12081 509 aaKnown RBP13.06□□□□□ -0.32
PTPRN-204ENST00000423636 CDR1P51861 262 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 PSMD2Q13200 908 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 AADACL2Q6P093 401 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 C1orf186Q6ZWK4 172 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 CPNE8Q86YQ8 564 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 CREG2Q8IUH2 290 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 NLGN2Q8NFZ4 835 aa13.06□□□□□ -0.32
PTPRN-204ENST00000423636 NFKBIEO00221 500 aa13.05□□□□□ -0.32
PTPRN-204ENST00000423636 EYA4O95677 639 aa13.05□□□□□ -0.32
PTPRN-204ENST00000423636 TUBB4AP04350 444 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms