RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CYP2C8P10632 490 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 SEL1L2Q5TEA6 688 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 GLT1D1Q96MS3 346 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 MTUS1Q9ULD2 1270 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 SYNJ2BP-COX16A0A087WUM0 186 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 TRIM49BA6NDI0 452 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 MSH4O15457 936 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 PRCPP42785 496 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 MXI1P50539 228 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 MYL7Q01449 175 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 PPATQ06203 517 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 ZNF568Q3ZCX4 644 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 GMLQ99445 158 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 SNX25Q9H3E2 840 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 TOPORSQ9NS56 1045 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-201ENST00000421999 COX16Q9P0S2 106 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 SSX2IPQ9Y2D8 614 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 RRP9O43818 475 aaKnown RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 LRRN2O75325 713 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 ELF1P32519 619 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 DSTYKQ6XUX3 929 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 OR8K1Q8NGG5 319 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 NEK9Q8TD19 979 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 PSMB7Q99436 277 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 MTRQ99707 1265 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 POLIQ9UNA4 740 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 ROBO3Q96MS0 1386 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 ZNF233A6NK53 670 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 TBX3O15119 743 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 GH1P01241 217 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 ARP10275 920 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 MCM3P25205 808 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 COPB1P53618 953 aaKnown RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 PTK2Q05397 1052 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 FUT2Q10981 343 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 PPFIA1Q13136 1202 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 C17orf53Q8N3J3 647 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 SYTL5Q8TDW5 730 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 ZC3H15Q8WU90 426 aaKnown RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 TRIM9Q9C026 710 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 SPATC1LQ9H0A9 340 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 ASCC2Q9H1I8 757 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 PFASO15067 1338 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 SIPA1L3O60292 1781 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 NUP188Q5SRE5 1749 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 C10orf71Q711Q0 1435 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 NPHP3-ACAD11A0A0J9YXS1 232 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 PDHXO00330 501 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 CD58P19256 250 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 SREBF1P36956 1147 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 PSMD2Q13200 908 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 ZRSR2Q15696 482 aaKnown RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 TMTC1Q8IUR5 882 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 NRBP1Q9UHY1 535 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 PCDHB4Q9Y5E5 795 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 NHSQ6T4R5 1651 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 ATP2A1O14983 1001 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 ZBTB24O43167 697 aaPredicted RBP10.6□□□□□ -0.71
CMSS1-201ENST00000421999 PDE6CP51160 858 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 PLEKHH3Q7Z736 793 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 RNF149Q8NC42 400 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 RWDD2AQ9UIY3 292 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 RASAL2Q9UJF2 1139 aa10.6□□□□□ -0.71
CMSS1-201ENST00000421999 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
CMSS1-201ENST00000421999 EZRP15311 586 aaKnown RBP10.59□□□□□ -0.71
CMSS1-201ENST00000421999 RGS2P41220 211 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 COASYQ13057 564 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 PPP1R7Q15435 360 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 SLFN12LQ6IEE8 588 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 ENGASEQ8NFI3 743 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 GCOM2Q9BZD3 368 aaPredicted RBP10.59□□□□□ -0.71
CMSS1-201ENST00000421999 TSPYL1Q9H0U9 437 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 TJP1Q07157 1748 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 PVALEFA0A1B0GWK0 134 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 ALDH1A1P00352 501 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 TFRCP02786 760 aaKnown RBP10.59□□□□□ -0.71
CMSS1-201ENST00000421999 ABCD1P33897 745 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 ARL1P40616 181 aaPredicted RBP10.59□□□□□ -0.71
CMSS1-201ENST00000421999 MYO1EQ12965 1108 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 MUM1L1Q5H9M0 696 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 FAM117BQ6P1L5 589 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 SYT10Q6XYQ8 523 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 SCARA5Q6ZMJ2 495 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 MAATS1Q7Z4T9 603 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 SMC1BQ8NDV3 1235 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 MRFAP1L1Q96HT8 127 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 LBHD1Q9BQE6 289 aaPredicted RBP10.59□□□□□ -0.71
CMSS1-201ENST00000421999 SLITRK6Q9H5Y7 841 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 ADAMTS7Q9UKP4 1686 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 EFCC1Q9HA90 598 aa10.59□□□□□ -0.71
CMSS1-201ENST00000421999 YBX3P16989 372 aaKnown RBP eCLIP10.58□□□□□ -0.723e-9■■■□□ 15.9
CMSS1-201ENST00000421999 TMEM62Q0P6H9 643 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 SKIV2LQ15477 1246 aaKnown RBP10.58□□□□□ -0.72
CMSS1-201ENST00000421999 DEFB115Q30KQ5 88 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 CCDC25Q86WR0 208 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 PDCD2LQ9BRP1 358 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 WDR18Q9BV38 432 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 IMPACTQ9P2X3 320 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 LTBP3Q9NS15 1303 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms