RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RPLP2P05387 115 aaKnown RBP17.63■□□□□ 0.41
BRAT1-202ENST00000421712 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
BRAT1-202ENST00000421712 TMOD1P28289 359 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 YWHABP31946 246 aaKnown RBP17.63■□□□□ 0.41
BRAT1-202ENST00000421712 RFC2P35250 354 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 EPHB4P54760 987 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 RBL2Q08999 1139 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 TMEM62Q0P6H9 643 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 FOXD4L6Q3SYB3 417 aaPredicted RBP17.63■□□□□ 0.41
BRAT1-202ENST00000421712 HAUS3Q68CZ6 603 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 EFCAB12Q6NXP0 572 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 FOXD4L3Q6VB84 417 aaPredicted RBP17.63■□□□□ 0.41
BRAT1-202ENST00000421712 CEP170P1Q96L14 293 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 HSD17B14Q9BPX1 270 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 WRAP73Q9P2S5 460 aaPredicted RBP17.63■□□□□ 0.41
BRAT1-202ENST00000421712 CLIC4Q9Y696 253 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 STK24Q9Y6E0 443 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 EVPLQ92817 2033 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 SMIM35A0A1B0GVV1 85 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 STBD1O95210 358 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 C22orf31O95567 290 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 FGBP02675 491 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 CCT6AP40227 531 aaKnown RBP17.62■□□□□ 0.41
BRAT1-202ENST00000421712 NPEPPSP55786 919 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 SHHQ15465 462 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 XKR9Q5GH70 373 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 IER5Q5VY09 327 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 KRT79Q5XKE5 535 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 ARL6IP4Q66PJ3 421 aaKnown RBP17.62■□□□□ 0.41
BRAT1-202ENST00000421712 ZNF365Q70YC5 407 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 ANO5Q75V66 913 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 TDHQ8IZJ6 230 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 NME8Q8N427 588 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 ZNF396Q96N95 335 aaPredicted RBP17.62■□□□□ 0.41
BRAT1-202ENST00000421712 TUFT1Q9NNX1 390 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 CYP26B1Q9NR63 512 aa17.62■□□□□ 0.41
BRAT1-202ENST00000421712 A0A087WWV3 80 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 ZBTB39O15060 712 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 MED24O75448 989 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 F13A1P00488 732 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 PFKMP08237 780 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 CLCN3P51790 818 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 PKP1Q13835 747 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 ZRSR1Q15695 479 aaKnown RBP17.61■□□□□ 0.41
BRAT1-202ENST00000421712 IL17AQ16552 155 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 PSRC1Q6PGN9 363 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-202ENST00000421712 OTOP2Q7RTS6 562 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 RPAINQ86UA6 219 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 CATSPER3Q86XQ3 398 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 LRRC71Q8N4P6 559 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 SNX29Q8TEQ0 813 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 PIGOQ8TEQ8 1089 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 RNPC3Q96LT9 517 aaKnown RBP17.61■□□□□ 0.41
BRAT1-202ENST00000421712 MAP7D2Q96T17 732 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.61■□□□□ 0.413e-7■■□□□ 14.2
BRAT1-202ENST00000421712 POLR3CQ9BUI4 534 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-202ENST00000421712 AKT3Q9Y243 479 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 GINS2Q9Y248 185 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 CDY2AQ9Y6F7 541 aa17.61■□□□□ 0.41
BRAT1-202ENST00000421712 NBNO60934 754 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 CHRNA1P02708 482 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 SPATA31C1P0DKV0 1188 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 ACTN1P12814 892 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 RPA1P27694 616 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 DNM2P50570 870 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 POLGP54098 1239 aaPredicted RBP17.6■□□□□ 0.41
BRAT1-202ENST00000421712 MRPS6P82932 125 aaKnown RBP17.6■□□□□ 0.41
BRAT1-202ENST00000421712 TARBP2Q15633 366 aaKnown RBP17.6■□□□□ 0.41
BRAT1-202ENST00000421712 TMEM240Q5SV17 173 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 C9orf50Q5SZB4 431 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 C16orf59Q7L2K0 433 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 KIAA0319LQ8IZA0 1049 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 IGSF22Q8N9C0 903 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 SLC7A3Q8WY07 619 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 NACC1Q96RE7 527 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 PPP1R16BQ96T49 567 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 JPH2Q9BR39 696 aaPredicted RBP17.6■□□□□ 0.41
BRAT1-202ENST00000421712 MTIF3Q9H2K0 278 aaKnown RBP17.6■□□□□ 0.41
BRAT1-202ENST00000421712 PRO3102Q9H379 93 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 TFIP11Q9UBB9 837 aaKnown RBP17.6■□□□□ 0.41
BRAT1-202ENST00000421712 SCN5AQ14524 2016 aa17.6■□□□□ 0.41
BRAT1-202ENST00000421712 PP2D1A8MPX8 630 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 ZBBXA8MT70 800 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 VTNP04004 478 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 MARCKSP29966 332 aaPredicted RBP17.59■□□□□ 0.41
BRAT1-202ENST00000421712 CDC25AP30304 524 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 ANP32AP39687 249 aaKnown RBP17.59■□□□□ 0.41
BRAT1-202ENST00000421712 STK38Q15208 465 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 FAM26DQ5JW98 314 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 TRAF7Q6Q0C0 670 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 POTEGQ6S5H5 508 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 EXOC8Q8IYI6 725 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 ZNF579Q8NAF0 562 aaKnown RBP17.59■□□□□ 0.41
BRAT1-202ENST00000421712 SCLT1Q96NL6 688 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 BMP2KQ9NSY1 1161 aaPredicted RBP17.59■□□□□ 0.41
BRAT1-202ENST00000421712 ANKEF1Q9NU02 776 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 TRPV2Q9Y5S1 764 aa17.59■□□□□ 0.41
BRAT1-202ENST00000421712 LYPLA2O95372 231 aa17.58■□□□□ 0.4
BRAT1-202ENST00000421712 GHRP10912 638 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms