RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 ASIC1P78348 528 aa23.95■■□□□ 1.42
ABCF3-202ENST00000421340 GIT2Q14161 759 aa23.95■■□□□ 1.42
ABCF3-202ENST00000421340 PLCB4Q15147 1175 aa23.95■■□□□ 1.42
ABCF3-202ENST00000421340 EXOC8Q8IYI6 725 aa23.95■■□□□ 1.42
ABCF3-202ENST00000421340 CEP170P1Q96L14 293 aa23.95■■□□□ 1.42
ABCF3-202ENST00000421340 CCDC43Q96MW1 224 aaKnown RBP23.95■■□□□ 1.42
ABCF3-202ENST00000421340 CYP26B1Q9NR63 512 aa23.95■■□□□ 1.42
ABCF3-202ENST00000421340 MAN1B1Q9UKM7 699 aa23.95■■□□□ 1.42
ABCF3-202ENST00000421340 FRMD3A2A2Y4 597 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 HBP1O60381 514 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 RHOBTB3O94955 611 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 CTCFP49711 727 aaPredicted RBP23.94■■□□□ 1.42
ABCF3-202ENST00000421340 NLRP12P59046 1061 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 TYRO3Q06418 890 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 PSMD2Q13200 908 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 MORC3Q14149 939 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 TARBP2Q15633 366 aaKnown RBP23.94■■□□□ 1.42
ABCF3-202ENST00000421340 FSCN1Q16658 493 aaKnown RBP23.94■■□□□ 1.42
ABCF3-202ENST00000421340 RUSC1Q9BVN2 902 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 HMX1Q9NP08 348 aaPredicted RBP23.94■■□□□ 1.42
ABCF3-202ENST00000421340 ANO10Q9NW15 660 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 DDX20Q9UHI6 824 aaKnown RBP23.94■■□□□ 1.42
ABCF3-202ENST00000421340 ODF2LQ9ULJ1 636 aa23.94■■□□□ 1.42
ABCF3-202ENST00000421340 H3BRB1 525 aa23.93■■□□□ 1.42
ABCF3-202ENST00000421340 ZEB2O60315 1214 aa23.93■■□□□ 1.42
ABCF3-202ENST00000421340 DGAT1O75907 488 aa23.93■■□□□ 1.42
ABCF3-202ENST00000421340 CAVIN2O95810 425 aa23.93■■□□□ 1.42
ABCF3-202ENST00000421340 KRT18P05783 430 aaKnown RBP23.93■■□□□ 1.42
ABCF3-202ENST00000421340 STX1AQ16623 288 aa23.93■■□□□ 1.42
ABCF3-202ENST00000421340 DYMQ7RTS9 669 aa23.93■■□□□ 1.42
ABCF3-202ENST00000421340 CCDC65Q8IXS2 484 aa23.93■■□□□ 1.42
ABCF3-202ENST00000421340 TUT1Q9H6E5 874 aaKnown RBP23.93■■□□□ 1.42
ABCF3-202ENST00000421340 PDLIM7Q9NR12 457 aa23.93■■□□□ 1.42
ABCF3-202ENST00000421340 SEPT9Q9UHD8 586 aaPredicted RBP23.93■■□□□ 1.42
ABCF3-202ENST00000421340 DOCK5Q9H7D0 1870 aa23.92■■□□□ 1.42
ABCF3-202ENST00000421340 SYNRGQ9UMZ2 1314 aa23.92■■□□□ 1.42
ABCF3-202ENST00000421340 CST5P28325 142 aaPredicted RBP23.92■■□□□ 1.42
ABCF3-202ENST00000421340 RFC5P40937 340 aa23.92■■□□□ 1.42
ABCF3-202ENST00000421340 NPEPPSP55786 919 aa23.92■■□□□ 1.42
ABCF3-202ENST00000421340 EHHADHQ08426 723 aa23.92■■□□□ 1.42
ABCF3-202ENST00000421340 PKN2Q16513 984 aaKnown RBP23.92■■□□□ 1.42
ABCF3-202ENST00000421340 KMT5BQ4FZB7 885 aa23.92■■□□□ 1.42
ABCF3-202ENST00000421340 CT47A1Q5JQC4 288 aaPredicted RBP23.92■■□□□ 1.42
ABCF3-202ENST00000421340 ZNF484Q5JVG2 852 aa23.92■■□□□ 1.42
ABCF3-202ENST00000421340 CTU1Q7Z7A3 348 aaKnown RBP23.92■■□□□ 1.42
ABCF3-202ENST00000421340 TRIM50Q86XT4 487 aa23.92■■□□□ 1.42
ABCF3-202ENST00000421340 LENG1Q96BZ8 264 aaPredicted RBP23.92■■□□□ 1.42
ABCF3-202ENST00000421340 CEP89Q96ST8 783 aa23.92■■□□□ 1.42
ABCF3-202ENST00000421340 ADAMTS4O75173 837 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 F2P00734 622 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 GAP43P17677 238 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 PLA2G4FQ68DD2 849 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 MLKLQ8NB16 471 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 MCPH1Q8NEM0 835 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 KLHDC9Q8NEP7 349 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 REEP2Q9BRK0 252 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 DHX33Q9H6R0 707 aaKnown RBP23.91■■□□□ 1.42
ABCF3-202ENST00000421340 XPNPEP3Q9NQH7 507 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 EXOC1Q9NV70 894 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 PANK4Q9NVE7 773 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 COL4A3BPQ9Y5P4 624 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 COL1A2P08123 1366 aa23.91■■□□□ 1.42
ABCF3-202ENST00000421340 TMEM150BA6NC51 233 aa23.9■■□□□ 1.42
ABCF3-202ENST00000421340 C6orf222P0C671 652 aaPredicted RBP23.9■■□□□ 1.42
ABCF3-202ENST00000421340 ZNF131P52739 623 aa23.9■■□□□ 1.42
ABCF3-202ENST00000421340 ZNF658Q5TYW1 1059 aaPredicted RBP23.9■■□□□ 1.42
ABCF3-202ENST00000421340 KATNAL1Q9BW62 490 aa23.9■■□□□ 1.42
ABCF3-202ENST00000421340 TSPY26PQ9H489 355 aa23.9■■□□□ 1.42
ABCF3-202ENST00000421340 RNPEPQ9H4A4 650 aa23.9■■□□□ 1.42
ABCF3-202ENST00000421340 SEL1LQ9UBV2 794 aa23.9■■□□□ 1.42
ABCF3-202ENST00000421340 NPHP3-ACAD11A0A0J9YXS1 232 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 HAS3O00219 553 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 BIN1O00499 593 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 ZNF286BP0CG31 522 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 HSPA1AP0DMV8 641 aaKnown RBP23.89■■□□□ 1.41
ABCF3-202ENST00000421340 HSPA1BP0DMV9 641 aaKnown RBP23.89■■□□□ 1.41
ABCF3-202ENST00000421340 IDEP14735 1019 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 BMP6P22004 513 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 MTERF2Q49AM1 385 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 COBLL1Q53SF7 1204 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 GNASQ5JWF2 1037 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 KAT2BQ92831 832 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 DRC1Q96MC2 740 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 JPH2Q9BR39 696 aaPredicted RBP23.89■■□□□ 1.41
ABCF3-202ENST00000421340 C17orf75Q9HAS0 396 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 ATP6V0A4Q9HBG4 840 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 KCNG1Q9UIX4 513 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 TRPC6Q9Y210 931 aa23.89■■□□□ 1.41
ABCF3-202ENST00000421340 ZBTB42B2RXF5 422 aa23.88■■□□□ 1.41
ABCF3-202ENST00000421340 GAS2O43903 313 aaKnown RBP23.88■■□□□ 1.41
ABCF3-202ENST00000421340 TBCAO75347 108 aaKnown RBP23.88■■□□□ 1.41
ABCF3-202ENST00000421340 MAFO75444 373 aaPredicted RBP23.88■■□□□ 1.41
ABCF3-202ENST00000421340 MARK3P27448 753 aa23.88■■□□□ 1.41
ABCF3-202ENST00000421340 RTP1P59025 263 aa23.88■■□□□ 1.41
ABCF3-202ENST00000421340 PURAQ00577 322 aaKnown RBP23.88■■□□□ 1.41
ABCF3-202ENST00000421340 BEX3Q00994 111 aa23.88■■□□□ 1.41
ABCF3-202ENST00000421340 LHX8Q68G74 356 aa23.88■■□□□ 1.41
ABCF3-202ENST00000421340 CCSAPQ6IQ19 270 aaPredicted RBP23.88■■□□□ 1.41
ABCF3-202ENST00000421340 TRMT1LQ7Z2T5 733 aaKnown RBP23.88■■□□□ 1.41
ABCF3-202ENST00000421340 PCSK9Q8NBP7 692 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms