RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 RGS16O15492 202 aaPredicted RBP9.13□□□□□ -0.95
UBR4-206ENST00000419533 MAPK6Q16659 721 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 OR6B2Q6IFH4 312 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 TTBK2Q6IQ55 1244 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 EFCAB13Q8IY85 973 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 PARK7Q99497 189 aaKnown RBP9.13□□□□□ -0.95
UBR4-206ENST00000419533 C2orf40Q9H1Z8 148 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 PCDHB6Q9Y5E3 794 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 COL22A1Q8NFW1 1626 aaPredicted RBP9.13□□□□□ -0.95
UBR4-206ENST00000419533 NEDD4P46934 1319 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 NFKBIAP25963 317 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 PEX3P56589 373 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 RPS6KA2Q15349 733 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 ELF2Q15723 593 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 ARL13BQ3SXY8 428 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 TRIM56Q9BRZ2 755 aaKnown RBP9.13□□□□□ -0.95
UBR4-206ENST00000419533 MAN1B1Q9UKM7 699 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 GOLGA8SH3BPF8 625 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 STAT3P40763 770 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 ILDR2Q71H61 639 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 TBC1D10CQ8IV04 446 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 MRC1P22897 1456 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 GLTPD2A6NH11 291 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 F5H6K3 240 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 KLRC3Q07444 240 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 C10orf76Q5T2E6 689 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 NLGN2Q8NFZ4 835 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 TDRD7Q8NHU6 1098 aaKnown RBP9.13□□□□□ -0.95
UBR4-206ENST00000419533 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.13□□□□□ -0.95
UBR4-206ENST00000419533 SCYL1Q96KG9 808 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 MTRQ99707 1265 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 ZC3H4Q9UPT8 1303 aaKnown RBP9.13□□□□□ -0.95
UBR4-206ENST00000419533 CTNNA1P35221 906 aaKnown RBP9.13□□□□□ -0.95
UBR4-206ENST00000419533 CUL4AQ13619 759 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 TAF1CQ15572 869 aaPredicted RBP9.13□□□□□ -0.95
UBR4-206ENST00000419533 SAMD7Q7Z3H4 446 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 GAS2L3Q86XJ1 694 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 SKA2Q8WVK7 121 aaPredicted RBP9.13□□□□□ -0.95
UBR4-206ENST00000419533 FAM151AQ8WW52 585 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 DESI2Q9BSY9 194 aa9.13□□□□□ -0.95
UBR4-206ENST00000419533 TRPM3Q9HCF6 1732 aaPredicted RBP9.12□□□□□ -0.95
UBR4-206ENST00000419533 FAM196BA6NMK8 535 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 F8W8V4 182 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 ZNF131P52739 623 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 FKBP1AP62942 108 aaKnown RBP9.12□□□□□ -0.95
UBR4-206ENST00000419533 ZNF667Q5HYK9 610 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 SIRT2Q8IXJ6 389 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 PAGE5Q96GU1 130 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 POLLQ9UGP5 575 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 MAD1L1Q9Y6D9 718 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 NDUFAB1O14561 156 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 TNPO2O14787 897 aaKnown RBP9.12□□□□□ -0.95
UBR4-206ENST00000419533 TROVE2P10155 538 aaKnown RBP eCLIP9.12□□□□□ -0.95
UBR4-206ENST00000419533 CASP14P31944 242 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 VPS41P49754 854 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 GTF2A2P52657 109 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 ATP11AP98196 1134 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 TWF2Q6IBS0 349 aaKnown RBP9.12□□□□□ -0.95
UBR4-206ENST00000419533 FBXO33Q7Z6M2 555 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 VSIG1Q86XK7 387 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 CCDC13Q8IYE1 715 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 OR6B3Q8NGW1 331 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 RAET1EQ8TD07 263 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 PSPC1Q8WXF1 523 aaKnown RBP9.12□□□□□ -0.95
UBR4-206ENST00000419533 MCUR1Q96AQ8 359 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 RPAP3Q9H6T3 665 aaPredicted RBP9.12□□□□□ -0.95
UBR4-206ENST00000419533 DONSONQ9NYP3 566 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 MCF2LO15068 1137 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 CLDN3O15551 220 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 PRPSAP2O60256 369 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 LRRN2O75325 713 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 CSPG5O95196 566 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 CD58P19256 250 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 STX2P32856 288 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 DMTNQ08495 405 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 ANKRD20A3Q5VUR7 823 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 CCNYQ8ND76 341 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 ELP3Q9H9T3 547 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 C19orf81C9J6K1 198 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 SGK1O00141 431 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 ORC4O43929 436 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 KRT1P04264 644 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 P4HBP07237 508 aaKnown RBP9.12□□□□□ -0.95
UBR4-206ENST00000419533 THNSL1Q8IYQ7 743 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 BEST2Q8NFU1 509 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 EPSTI1Q96J88 318 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 LMCD1Q9NZU5 365 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.12□□□□□ -0.95
UBR4-206ENST00000419533 BCAP29Q9UHQ4 241 aa9.12□□□□□ -0.95
UBR4-206ENST00000419533 CCDC160A6NGH7 325 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 RNF40O75150 1001 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 CDC25BP30305 580 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 TSPY1Q01534 308 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 TKFCQ3LXA3 575 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 PADI6Q6TGC4 694 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
UBR4-206ENST00000419533 SPATA33Q96N06 139 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 RILPQ96NA2 401 aa9.11□□□□□ -0.95
UBR4-206ENST00000419533 NCAPGQ9BPX3 1015 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms