RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 TMEM59LQ9UK28 342 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 TAL1P17542 331 aaPredicted RBP16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 ECHS1P30084 290 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 DHX9Q08211 1270 aaKnown RBP16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 ZNF844Q08AG5 666 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 SF3B2Q13435 895 aaKnown RBP16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 KRT71Q3SY84 523 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 HYIQ5T013 277 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 C10orf76Q5T2E6 689 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 PRR5LQ6MZQ0 368 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 LRRC57Q8N9N7 239 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 TBC1D22AQ8WUA7 517 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 CALUO43852 315 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 TBCAO75347 108 aaKnown RBP16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 FAM107AO95990 144 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 NR3C1P04150 777 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 COPB2P35606 906 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 NOVP48745 357 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 SETQ01105 290 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 FRMD5Q7Z6J6 570 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 ACTRT1Q8TDG2 376 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 LMBR1Q8WVP7 490 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 OSGEPQ9NPF4 335 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 FGGP02679 453 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 IBSPP21815 317 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 USP8P40818 1118 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 GABPAQ06546 454 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 SHROOM1Q2M3G4 852 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 GPATCH11Q8N954 259 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 ERMNQ8TAM6 284 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 GAKO14976 1311 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 ARHGAP4P98171 946 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 TCP10Q12799 353 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 SLC30A10Q6XR72 485 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 RUFY4Q6ZNE9 571 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 SPATS2Q86XZ4 545 aaKnown RBP16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 GLYCTKQ8IVS8 523 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 SUGP1Q8IWZ8 645 aaKnown RBP16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 CCDC26Q8TAB7 109 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 TBC1D16Q8TBP0 767 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 FAM163AQ96GL9 167 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 TRIM51Q9BSJ1 452 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 ATP8A1Q9Y2Q0 1164 aa16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-203ENST00000419007 DCDC2CA8MYV0 355 aa16.52■□□□□ 0.24
SEMA3B-203ENST00000419007 HOXD13P35453 343 aa16.52■□□□□ 0.24
SEMA3B-203ENST00000419007 SLFN12Q8IYM2 578 aa16.52■□□□□ 0.24
SEMA3B-203ENST00000419007 CYFIP2Q96F07 1278 aa16.52■□□□□ 0.24
SEMA3B-203ENST00000419007 KCNMB3Q9NPA1 279 aa16.52■□□□□ 0.24
SEMA3B-203ENST00000419007 UTP11Q9Y3A2 253 aaKnown RBP16.52■□□□□ 0.24
SEMA3B-203ENST00000419007 WNK3Q9BYP7 1800 aa16.52■□□□□ 0.24
SEMA3B-203ENST00000419007 SMIM23A6NLE4 172 aa16.52■□□□□ 0.23
SEMA3B-203ENST00000419007 DDX3XO00571 662 aaKnown RBP eCLIP16.52■□□□□ 0.23
SEMA3B-203ENST00000419007 SHMT1P34896 483 aa16.52■□□□□ 0.23
SEMA3B-203ENST00000419007 GALCP54803 685 aa16.52■□□□□ 0.23
SEMA3B-203ENST00000419007 MAGOHP61326 146 aaKnown RBP16.52■□□□□ 0.23
SEMA3B-203ENST00000419007 MAGOHBQ96A72 148 aaKnown RBP16.52■□□□□ 0.23
SEMA3B-203ENST00000419007 CABS1Q96KC9 395 aa16.52■□□□□ 0.23
SEMA3B-203ENST00000419007 GOLGA6L7A0A1B0GV03 622 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 APBA3O96018 575 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 RPL13P26373 211 aaKnown RBP16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 CACNB3P54284 484 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 CCDC121Q6ZUS5 278 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 PIGOQ8TEQ8 1089 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 NAP1L4Q99733 375 aaKnown RBP16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 PITPNM2Q9BZ72 1349 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 GMNCA6NCL1 334 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 ZNF76P36508 570 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 STAT1P42224 750 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 EPHA7Q15375 998 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 KSR1Q8IVT5 923 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 LRRC4BQ9NT99 713 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 RGL1Q9NZL6 768 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 AMFRQ9UKV5 643 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 TRAF3IP3Q9Y228 551 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 IGKV6D-41A0A0C4DH26 115 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 ZNF211Q13398 564 aaPredicted RBP16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 LRIG3Q6UXM1 1119 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 CNPY4Q8N129 248 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 SLC35C1Q96A29 364 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 NR2E1Q9Y466 385 aa16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 TNRC6CQ9HCJ0 1690 aaKnown RBP16.51■□□□□ 0.23
SEMA3B-203ENST00000419007 TLDC2A0PJX2 215 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 SPDYE3A6NKU9 549 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 CCDC188H7C350 402 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 RGL2O15211 777 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 CHMP2AO43633 222 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 EVI5O60447 810 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 BUB1BO60566 1050 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 HOXA13P31271 388 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 PRPF38AQ8NAV1 312 aaKnown RBP16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 CYP2W1Q8TAV3 490 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 CCDC114Q96M63 670 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 RUSC1Q9BVN2 902 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 SWAP70Q9UH65 585 aa16.5■□□□□ 0.23
SEMA3B-203ENST00000419007 BTNL10A8MVZ5 291 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms