RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CEP72Q9P209 647 aa14.37□□□□□ -0.11
TNFRSF8-203ENST00000417814 DNAJC12Q9UKB3 198 aa14.37□□□□□ -0.11
TNFRSF8-203ENST00000417814 LRRC63Q05C16 580 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 DRAP1Q14919 205 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 PPP1R7Q15435 360 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 GBP6Q6ZN66 633 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 FAM178BQ8IXR5 827 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 AMFRQ9UKV5 643 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 UTP11Q9Y3A2 253 aaKnown RBP14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 RABGAP1Q9Y3P9 1069 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 ZBTB5O15062 677 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 PPP1R12BO60237 982 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 KIF4AO95239 1232 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 HNRNPH1P31943 449 aaKnown RBP14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 ECE1P42892 770 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 ZNF543Q08ER8 600 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 HGSNATQ68CP4 663 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 C16orf86Q6ZW13 317 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 NLRP14Q86W24 1093 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 KAT5Q92993 513 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 MTA3Q9BTC8 594 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 KIFC3Q9BVG8 833 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 FBXO28Q9NVF7 368 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 PSD3Q9NYI0 1048 aa14.36□□□□□ -0.11
TNFRSF8-203ENST00000417814 LAD1O00515 517 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 SYCP2LQ5T4T6 812 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 HS2ST1Q7LGA3 356 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 ERMNQ8TAM6 284 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 ZNF473Q8WTR7 871 aaKnown RBP14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 ZNF668Q96K58 619 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 PWWP2AQ96N64 755 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 ELAC2Q9BQ52 826 aaKnown RBP14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 LZTS2Q9BRK4 669 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 STK17AQ9UEE5 414 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 PLEKHG2Q9H7P9 1386 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 DDTLA6NHG4 134 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 F5H6K3 240 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 EML1O00423 815 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 SOX10P56693 466 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 KLRC3Q07444 240 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 DNAJC19Q96DA6 116 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 HAUS2Q9NVX0 235 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 PGRMC1O00264 195 aaKnown RBP14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 MARCKSL1P49006 195 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 TUBB4BP68371 445 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 UBAP2Q5T6F2 1119 aaKnown RBP14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 EMBQ6PCB8 327 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 PRUNE1Q86TP1 453 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 FBXO11Q86XK2 927 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 EFCAB13Q8IY85 973 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 SLC20A1Q8WUM9 679 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 CUEDC2Q9H467 287 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 PPP1R9AQ9ULJ8 1098 aa14.35□□□□□ -0.11
TNFRSF8-203ENST00000417814 FAM86B1E9PN63 330 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 FAM86B2P0C5J1 330 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 TM4SF1P30408 202 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 GALNT17Q6IS24 598 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 DPH6Q7L8W6 267 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 TBC1D1Q86TI0 1168 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 MMGT1Q8N4V1 131 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 C1orf54Q8WWF1 131 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 CXorf56Q9H5V9 222 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 KLHL11Q9NVR0 708 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 NAGPAQ9UK23 515 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 USP21Q9UK80 565 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 OPLAHO14841 1288 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 GAS7O60861 476 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 MAP2K1Q02750 393 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 DGKZQ13574 1117 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 QPCTQ16769 361 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 LLGL2Q6P1M3 1020 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 USP38Q8NB14 1042 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 SLC35G2Q8TBE7 412 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 RBM46Q8TBY0 533 aaKnown RBP14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 SAAL1Q96ER3 474 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 MTMR9Q96QG7 549 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 THAP2Q9H0W7 228 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 LEMD3Q9Y2U8 911 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 CTDP1Q9Y5B0 961 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 PVALEFA0A1B0GWK0 134 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 TARSL2A2RTX5 802 aaKnown RBP14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 PPP1R37O75864 691 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 PON1P27169 355 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 RHBDL3P58872 404 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 PRKG1Q13976 671 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 NAB2Q15742 525 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 KNOP1Q1ED39 458 aaKnown RBP14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 CDC42EP5Q6NZY7 148 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 CERS5Q8N5B7 392 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 ZSWIM2Q8NEG5 633 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 RIC8AQ9NPQ8 531 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 ASIC3Q9UHC3 531 aa14.34□□□□□ -0.11
TNFRSF8-203ENST00000417814 SHBGP04278 402 aa14.33□□□□□ -0.11
TNFRSF8-203ENST00000417814 CCDC172P0C7W6 258 aa14.33□□□□□ -0.11
TNFRSF8-203ENST00000417814 PRPHP41219 470 aa14.33□□□□□ -0.11
TNFRSF8-203ENST00000417814 SMAD1Q15797 465 aaKnown RBP14.33□□□□□ -0.11
TNFRSF8-203ENST00000417814 LRCH2Q5VUJ6 765 aa14.33□□□□□ -0.11
TNFRSF8-203ENST00000417814 KAZNQ674X7 775 aa14.33□□□□□ -0.11
TNFRSF8-203ENST00000417814 MCTP2Q6DN12 878 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms