RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MBIPQ9NS73 344 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 HYPKQ9NX55 129 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 NXF1Q9UBU9 619 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 CD207Q9UJ71 328 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 SUGT1Q9Y2Z0 365 aa6.57□□□□□ -1.36
ECHDC1-206ENST00000417628 COL11A1P12107 1806 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 LINC01553A4QN01 128 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 H3BM21 787 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 STRNO43815 780 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 ENTPD3O75355 529 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 ASGR1P07306 291 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 SLURP2P0DP57 97 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 MAP2K3P46734 347 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 KCNJ6P48051 423 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 BACE1P56817 501 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 RPS26P62854 115 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 RING1Q06587 406 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 RALBP1Q15311 655 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 RNFT1Q5M7Z0 435 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 ZC3H14Q6PJT7 736 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 GOLM1Q8NBJ4 401 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 PCSK9Q8NBP7 692 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 TTC9Q92623 222 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 FRAT1Q92837 279 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 SEC16BQ96JE7 1060 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 MAML3Q96JK9 1138 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 GINM1Q9NU53 330 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 UBP1Q9NZI7 540 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 FRRS1LQ9P0K9 344 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 ANKFY1Q9P2R3 1169 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 STARD13Q9Y3M8 1113 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 PCDHB5Q9Y5E4 795 aa6.56□□□□□ -1.36
ECHDC1-206ENST00000417628 GCN1Q92616 2671 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 SIP14410 1827 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 KIF16BQ96L93 1317 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 SALL1Q9NSC2 1324 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 ELOA3CA0A087WX78 387 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 MYADML2A6NDP7 307 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 ELOA3DA6NLF2 546 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 C19orf81C9J6K1 198 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 MAFGO15525 162 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 COBLO75128 1261 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 FRAT2O75474 233 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 BAIAP3O94812 1187 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 ESRRAP11474 423 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 NASPP49321 788 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 SHC2P98077 582 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 ELOA3BQ3SY89 546 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 SNAP47Q5SQN1 464 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 ZNF787Q6DD87 383 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 PSAPL1Q6NUJ1 521 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 CCDC105Q8IYK2 499 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 ELOA3Q8NG57 546 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 CRBNQ96SW2 442 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 WDR18Q9BV38 432 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 MFSD1Q9H3U5 465 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 USP40Q9NVE5 1235 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 HDAC5Q9UQL6 1122 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 NUDCQ9Y266 331 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 EFR3BQ9Y2G0 817 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 R4GN57 208 aa6.55□□□□□ -1.36
ECHDC1-206ENST00000417628 ANKRD18BA2A2Z9 1011 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 DDTLA6NHG4 134 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 PLIN1O60240 522 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 TBX10O75333 385 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 C6orf222P0C671 652 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 VSIG8P0DPA2 414 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 EPHA1P21709 976 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 NME2P22392 152 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 PMLP29590 882 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 CDC27P30260 824 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 RFC2P35250 354 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 SOX9P48436 509 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 CLCN5P51795 746 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 PPP2R3AQ06190 1150 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 DLX2Q07687 328 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 BNC2Q6ZN30 1099 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 TRIM42Q8IWZ5 723 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 FBXO27Q8NI29 283 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 GRIN3AQ8TCU5 1115 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 FAM84BQ96KN1 310 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 SPATA32Q96LK8 384 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 CFAP53Q96M91 514 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 IDI2Q9BXS1 227 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 BABAM1Q9NWV8 329 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 KCNG1Q9UIX4 513 aa6.54□□□□□ -1.36
ECHDC1-206ENST00000417628 TRIOO75962 3097 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 ZBED9Q6R2W3 1325 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 CEP250Q9BV73 2442 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 FAM221AA4D161 298 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 B4GALT4O60513 344 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 F13A1P00488 732 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 ZNF865P0CJ78 1059 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 TAL1P17542 331 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 ARNTP27540 789 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 CAP2P40123 477 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 ZNF200P98182 395 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 UBE4AQ14139 1066 aa6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 CC2D1BQ5T0F9 858 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-206ENST00000417628 HGSNATQ68CP4 663 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms