RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CDCA3Q99618 268 aaPredicted RBP11.45□□□□□ -0.58
MDC1-202ENST00000416571 MXRA8Q9BRK3 442 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 C1orf112Q9NSG2 853 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 PCDHGC5Q9Y5F6 944 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 RBM8AQ9Y5S9 174 aaKnown RBP11.45□□□□□ -0.58
MDC1-202ENST00000416571 ZFHX4Q86UP3 3567 aa11.45□□□□□ -0.58
MDC1-202ENST00000416571 KMT2EQ8IZD2 1858 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 NFASCO94856 1347 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 SH2B2O14492 632 aaPredicted RBP11.44□□□□□ -0.58
MDC1-202ENST00000416571 SGSM2O43147 1006 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 KRT37O76014 449 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 FGF18O76093 207 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 ATF7P17544 494 aaPredicted RBP11.44□□□□□ -0.58
MDC1-202ENST00000416571 SLC26A2P50443 739 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 IER5LQ5T953 404 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 FAM160B1Q5W0V3 765 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 PDE12Q6L8Q7 609 aaKnown RBP11.44□□□□□ -0.58
MDC1-202ENST00000416571 MTHFD1LQ6UB35 978 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 SLC24A5Q71RS6 500 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 PHOX2BQ99453 314 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 ADAM2Q99965 735 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 TMX1Q9H3N1 280 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 TMEM260Q9NX78 707 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 SLC12A7Q9Y666 1083 aa11.44□□□□□ -0.58
MDC1-202ENST00000416571 DDX39AO00148 427 aaKnown RBP11.43□□□□□ -0.58
MDC1-202ENST00000416571 GPR182O15218 404 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 HBP1O60381 514 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 KLRC1P26715 233 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 PDE4AP27815 886 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 ZNF76P36508 570 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 NAPAP54920 295 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 DUSP6Q16828 381 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 CEP55Q53EZ4 464 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 SYNE3Q6ZMZ3 975 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 RAB11FIP4Q86YS3 637 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 MAP4K1Q92918 833 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 IRF2BPLQ9H1B7 796 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 ATP6V0A4Q9HBG4 840 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 ERVK-5Q9HDB9 667 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 ENTPD7Q9NQZ7 604 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 RGS18Q9NS28 235 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 PUF60Q9UHX1 559 aaKnown RBP11.43□□□□□ -0.58
MDC1-202ENST00000416571 NOC2LQ9Y3T9 749 aaKnown RBP11.43□□□□□ -0.58
MDC1-202ENST00000416571 CHD8Q9HCK8 2581 aa11.43□□□□□ -0.58
MDC1-202ENST00000416571 COL1A2P08123 1366 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 EPG5Q9HCE0 2579 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 FOSP01100 380 aaPredicted RBP11.42□□□□□ -0.58
MDC1-202ENST00000416571 ARP10275 920 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 LAG3P18627 525 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 TECP42680 631 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 LIFRP42702 1097 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 ERVFC1P60507 584 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 RBM10P98175 930 aaKnown RBP11.42□□□□□ -0.58
MDC1-202ENST00000416571 TCF15Q12870 199 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 PTPN21Q16825 1174 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 FAM102BQ5T8I3 360 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 PLPP4Q5VZY2 271 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 TMTC3Q6ZXV5 915 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 MICU3Q86XE3 530 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 CKAP2LQ8IYA6 745 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 FANCBQ8NB91 859 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 COLGALT1Q8NBJ5 622 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 CYP2W1Q8TAV3 490 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 ATP8B4Q8TF62 1192 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 SUSD6Q92537 303 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 PGBD1Q96JS3 809 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 PPP1R16BQ96T49 567 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 ANO3Q9BYT9 981 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 ZNF302Q9NR11 478 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 TYW1Q9NV66 732 aaKnown RBP11.42□□□□□ -0.58
MDC1-202ENST00000416571 TMEM161AQ9NX61 479 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 TCEAL9Q9UHQ7 104 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 ST3GAL5Q9UNP4 418 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 TRIOO75962 3097 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 EVPLQ92817 2033 aa11.42□□□□□ -0.58
MDC1-202ENST00000416571 C9IYK1 514 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 HOXA2O43364 376 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 MGEA5O60502 916 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 GFRA3O60609 400 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 ATG7O95352 703 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 AVPR2P30518 371 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 ADCY7P51828 1080 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 ITGB3BPQ13352 177 aaPredicted RBP11.41□□□□□ -0.58
MDC1-202ENST00000416571 ZNF484Q5JVG2 852 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 WWC2Q6AWC2 1192 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 ANKRD54Q6NXT1 300 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 PPP1R18Q6NYC8 613 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 MIS18BP1Q6P0N0 1132 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 LLGL2Q6P1M3 1020 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 PDXDC2PQ6P474 469 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 TEX2Q8IWB9 1127 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 KIAA0319LQ8IZA0 1049 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 ABI1Q8IZP0 508 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 VN1R2Q8NFZ6 395 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 MRPS27Q92552 414 aaKnown RBP11.41□□□□□ -0.58
MDC1-202ENST00000416571 ATOH1Q92858 354 aaPredicted RBP11.41□□□□□ -0.58
MDC1-202ENST00000416571 OSMRQ99650 979 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 TCF25Q9BQ70 676 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 APOL5Q9BWW9 433 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 AGO4Q9HCK5 861 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms