RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 RTKNQ9BST9 563 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 TBC1D17Q9HA65 648 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 ERAP1Q9NZ08 941 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 WNT16Q9UBV4 365 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 LOXHD1Q8IVV2 1947 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 PRR5-ARHGAP8B1AHC4 643 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 NARSO43776 548 aaKnown RBP18.23■□□□□ 0.51
CPNE1-208ENST00000414711 MGEA5O60502 916 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 STAM2O75886 525 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 MRPS9P82933 396 aaKnown RBP18.23■□□□□ 0.51
CPNE1-208ENST00000414711 ARHGAP8P85298 464 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 KRT17Q04695 432 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 ACAP1Q15027 740 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 ALX1Q15699 326 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 VARS2Q5ST30 1063 aaKnown RBP18.23■□□□□ 0.51
CPNE1-208ENST00000414711 CCDC149Q6ZUS6 474 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 C1orf210Q8IVY1 113 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 SAMD3Q8N6K7 520 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 MRPL43Q8N983 215 aaKnown RBP18.23■□□□□ 0.51
CPNE1-208ENST00000414711 ZKSCAN3Q9BRR0 538 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 C1orf112Q9NSG2 853 aa18.23■□□□□ 0.51
CPNE1-208ENST00000414711 DENND3A2RUS2 1198 aa18.22■□□□□ 0.51
CPNE1-208ENST00000414711 GCOM1H8Y6P7 765 aaPredicted RBP18.22■□□□□ 0.51
CPNE1-208ENST00000414711 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
CPNE1-208ENST00000414711 DCNP07585 359 aaKnown RBP18.22■□□□□ 0.51
CPNE1-208ENST00000414711 POLR2MP0CAP2 368 aa18.22■□□□□ 0.51
CPNE1-208ENST00000414711 FGFR1P11362 822 aa18.22■□□□□ 0.51
CPNE1-208ENST00000414711 CA8P35219 290 aa18.22■□□□□ 0.51
CPNE1-208ENST00000414711 PBX3P40426 434 aa18.22■□□□□ 0.51
CPNE1-208ENST00000414711 NFX1Q12986 1120 aaKnown RBP18.22■□□□□ 0.51
CPNE1-208ENST00000414711 KCNT2Q6UVM3 1135 aa18.22■□□□□ 0.51
CPNE1-208ENST00000414711 DGKHQ86XP1 1220 aa18.22■□□□□ 0.51
CPNE1-208ENST00000414711 ZNF558Q96NG5 402 aa18.22■□□□□ 0.51
CPNE1-208ENST00000414711 CELF4Q9BZC1 486 aaKnown RBP18.22■□□□□ 0.51
CPNE1-208ENST00000414711 DDX19BQ9UMR2 479 aa18.22■□□□□ 0.51
CPNE1-208ENST00000414711 PARP1P09874 1014 aaKnown RBP18.21■□□□□ 0.51
CPNE1-208ENST00000414711 SLC24A5Q71RS6 500 aa18.21■□□□□ 0.51
CPNE1-208ENST00000414711 ADAM2Q99965 735 aa18.21■□□□□ 0.51
CPNE1-208ENST00000414711 KAT14Q9H8E8 782 aa18.21■□□□□ 0.51
CPNE1-208ENST00000414711 RTEL1Q9NZ71 1219 aa18.21■□□□□ 0.51
CPNE1-208ENST00000414711 DLGAP2Q9P1A6 1054 aa18.21■□□□□ 0.51
CPNE1-208ENST00000414711 IGSF9Q9P2J2 1179 aa18.21■□□□□ 0.51
CPNE1-208ENST00000414711 CA14Q9ULX7 337 aa18.21■□□□□ 0.51
CPNE1-208ENST00000414711 ANKRD11Q6UB99 2663 aaPredicted RBP18.21■□□□□ 0.51
CPNE1-208ENST00000414711 FRMPD4Q14CM0 1322 aa18.21■□□□□ 0.51
CPNE1-208ENST00000414711 KDM3AQ9Y4C1 1321 aa18.21■□□□□ 0.51
CPNE1-208ENST00000414711 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 C9IYK1 514 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 FGAP02671 866 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 PCP11498 1178 aaKnown RBP18.2■□□□□ 0.5
CPNE1-208ENST00000414711 HAND2P61296 217 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 TMC5Q6UXY8 1006 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 MFSD6Q6ZSS7 791 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 FEZF2Q8TBJ5 459 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 GLG1Q92896 1179 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 SENP7Q9BQF6 1050 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 ATP6V0A4Q9HBG4 840 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 RGS18Q9NS28 235 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 SPG21Q9NZD8 308 aa18.2■□□□□ 0.5
CPNE1-208ENST00000414711 FASNP49327 2511 aaKnown RBP18.2■□□□□ 0.5
CPNE1-208ENST00000414711 RRN3P2A6NIE6 340 aa18.19■□□□□ 0.5
CPNE1-208ENST00000414711 SPTLC1O15269 473 aa18.19■□□□□ 0.5
CPNE1-208ENST00000414711 EPCAMP16422 314 aa18.19■□□□□ 0.5
CPNE1-208ENST00000414711 KRT76Q01546 638 aa18.19■□□□□ 0.5
CPNE1-208ENST00000414711 FAM43BQ6ZT52 329 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-208ENST00000414711 TBC1D10CQ8IV04 446 aa18.19■□□□□ 0.5
CPNE1-208ENST00000414711 LRRC43Q8N309 656 aa18.19■□□□□ 0.5
CPNE1-208ENST00000414711 SECISBP2LQ93073 1101 aaKnown RBP18.19■□□□□ 0.5
CPNE1-208ENST00000414711 TMEM161AQ9NX61 479 aa18.19■□□□□ 0.5
CPNE1-208ENST00000414711 SIT1Q9Y3P8 196 aa18.19■□□□□ 0.5
CPNE1-208ENST00000414711 NEDD4P46934 1319 aa18.19■□□□□ 0.5
CPNE1-208ENST00000414711 POTEMA6NI47 508 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 ZBTB5O15062 677 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 INSRRP14616 1297 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 DMWDQ09019 674 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 POTEGQ6S5H5 508 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 LRRC55Q6ZSA7 311 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 CABP7Q86V35 215 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 GIMAP8Q8ND71 665 aaPredicted RBP18.18■□□□□ 0.5
CPNE1-208ENST00000414711 PI4K2BQ8TCG2 481 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 ESR2Q92731 530 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 TMEM117Q9H0C3 514 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 ZMYM6O95789 1325 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 TTC41PQ6P2S7 1318 aa18.18■□□□□ 0.5
CPNE1-208ENST00000414711 CACNA1IQ9P0X4 2223 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-208ENST00000414711 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
CPNE1-208ENST00000414711 PPM1JQ5JR12 505 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 PHLDB3Q6NSJ2 640 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 GPR149Q86SP6 731 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 MAML2Q8IZL2 1156 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-208ENST00000414711 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 SMARCAD1Q9H4L7 1026 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 SFXN1Q9H9B4 322 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 USP18Q9UMW8 372 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 GINS2Q9Y248 185 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 PCDHA2Q9Y5H9 948 aa18.17■□□□□ 0.5
CPNE1-208ENST00000414711 GSTTP1A0A1W2PQM5 241 aa18.16■□□□□ 0.5
CPNE1-208ENST00000414711 RPS6KA5O75582 802 aa18.16■□□□□ 0.5
CPNE1-208ENST00000414711 HOXB3P14651 431 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms