RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MFSD6Q6ZSS7 791 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 OR6P1Q8NGX9 317 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 NEDD1Q8NHV4 660 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 SH3TC2Q8TF17 1288 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 GAL3ST3Q96A11 431 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 ATG4CQ96DT6 458 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 CCDC113Q9H0I3 377 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 PORCNQ9H237 461 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 SH2D4AQ9H788 454 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 VCPKMTQ9H867 229 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 EHMT1Q9H9B1 1298 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 KANSL2Q9H9L4 492 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 ZNF287Q9HBT7 754 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 CWC22Q9HCG8 908 aaKnown RBP5.73□□□□□ -1.49
VPS41-205ENST00000414632 AVENQ9NQS1 362 aaPredicted RBP5.73□□□□□ -1.49
VPS41-205ENST00000414632 ST7Q9NRC1 585 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 IL17RBQ9NRM6 502 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 MTMR4Q9NYA4 1195 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 BTBD7Q9P203 1132 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 GMPR2Q9P2T1 348 aaKnown RBP5.73□□□□□ -1.49
VPS41-205ENST00000414632 RBPJLQ9UBG7 517 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 ANAPC4Q9UJX5 808 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 TAF6LQ9Y6J9 622 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 ZMYM6O95789 1325 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 RAD50Q92878 1312 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 LCTP09848 1927 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 PLIN4Q96Q06 1357 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 F5H6K3 240 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 SOX1O00570 391 aaPredicted RBP5.72□□□□□ -1.49
VPS41-205ENST00000414632 WDR46O15213 610 aaKnown RBP5.72□□□□□ -1.49
VPS41-205ENST00000414632 ORC4O43929 436 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 TTLL1O95922 423 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 NDUFB10O96000 172 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 IMPDH2P12268 514 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 ELNP15502 786 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 TAL1P17542 331 aaPredicted RBP5.72□□□□□ -1.49
VPS41-205ENST00000414632 ADH6P28332 368 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 GCLCP48506 637 aaPredicted RBP5.72□□□□□ -1.49
VPS41-205ENST00000414632 CHMP4BP1P59074 171 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 SNAP25P60880 206 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 ERVK-24P63145 666 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 KLRC3Q07444 240 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 IMMTQ16891 758 aaKnown RBP5.72□□□□□ -1.49
VPS41-205ENST00000414632 FAM110CQ1W6H9 321 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 BMP2KLQ5H9B9 411 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 SLFN13Q68D06 897 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 GDF6Q6KF10 455 aaPredicted RBP5.72□□□□□ -1.49
VPS41-205ENST00000414632 KCTD1Q719H9 257 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 PDZD3Q86UT5 571 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 RAET1EQ8TD07 263 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 RUFY2Q8WXA3 655 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 DNAJC7Q99615 494 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 LPIN3Q9BQK8 851 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 DSCC1Q9BVC3 393 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 TNKS2Q9H2K2 1166 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 ACTR10Q9NZ32 417 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 FRRS1LQ9P0K9 344 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 NYAP2Q9P242 653 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 SRRDQ9UH36 339 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 MSRB2Q9Y3D2 182 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 MCM3APO60318 1980 aa5.72□□□□□ -1.49
VPS41-205ENST00000414632 ZNF236Q9UL36 1845 aa5.71□□□□□ -1.49
VPS41-205ENST00000414632 ENPP3O14638 875 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 CDC45O75419 566 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 CYP21A2P08686 494 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 ARAFP10398 606 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 MX2P20592 715 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 CYP2B6P20813 491 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 EPHA1P21709 976 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 MCCP23508 829 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 CDC25BP30305 580 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 FLT3LGP49771 235 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 RPL6Q02878 288 aaKnown RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 IKQ13123 557 aaPredicted RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 AP3B2Q13367 1082 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 COL9A3Q14050 684 aaPredicted RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 COG2Q14746 738 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 TMEM132BQ14DG7 1078 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 DDR2Q16832 855 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 CCDC96Q2M329 555 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 SLC9C1Q4G0N8 1177 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 SCARA3Q6AZY7 606 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 PSAPL1Q6NUJ1 521 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 STOX1Q6ZVD7 989 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 CYB5R4Q7L1T6 521 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 CHST3Q7LGC8 479 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 TICAM2Q86XR7 235 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 CCAR1Q8IX12 1150 aaKnown RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 LILRB2Q8N423 598 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 RBBP8NLQ8NC74 664 aaPredicted RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 GPRC5AQ8NFJ5 357 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 STAG1Q8WVM7 1258 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 NANOS1Q8WY41 292 aaKnown RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 TTC9Q92623 222 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 LPAR1Q92633 364 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 KCNB2Q92953 911 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 COA7Q96BR5 231 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 TMEM47Q9BQJ4 181 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 LSG1Q9H089 658 aaKnown RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 MORF4L1Q9UBU8 362 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms