RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 ATP1A3P13637 1013 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 ZNF18P17022 549 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 TM4SF4P48230 202 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 UBASH3AP57075 661 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 PRKCEQ02156 737 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 LY6KQ17RY6 165 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 FILIP1LQ4L180 1135 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 CDKAL1Q5VV42 579 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 C17orf99Q6UX52 265 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 STXBP4Q6ZWJ1 553 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 CCDC60Q8IWA6 550 aaPredicted RBP12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 DHX37Q8IY37 1157 aaKnown RBP12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 MYCT1Q8N699 235 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 SEPT1Q8WYJ6 367 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 MAML3Q96JK9 1138 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 MED15Q96RN5 788 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 XPO4Q9C0E2 1151 aaKnown RBP12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 HSD3B7Q9H2F3 369 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 PARVGQ9HBI0 331 aa12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 SAMSN1Q9NSI8 373 aaKnown RBP12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 MAGEC2Q9UBF1 373 aaPredicted RBP12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
SNRNP35-202ENST00000412157 HIP1RO75146 1068 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 ARIH2O95376 493 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 GCNT3O95395 438 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 LRRC63Q05C16 580 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 MAP2K5Q13163 448 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 CRHR2Q13324 411 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 LRRC41Q15345 812 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 HSP90AA4PQ58FG1 418 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 XKR3Q5GH77 459 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 CELF3Q5SZQ8 465 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 PRPF38BQ5VTL8 546 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 PLA2G4FQ68DD2 849 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 CENPPQ6IPU0 288 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 TTI2Q6NXR4 508 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 MAMDC4Q6UXC1 1216 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 MSL3Q8N5Y2 521 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 CSGALNACT2Q8N6G5 542 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 SPC24Q8NBT2 197 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 SOCS4Q8WXH5 440 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 CEP170P1Q96L14 293 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 DRC1Q96MC2 740 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 CTAGE1Q96RT6 745 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 AZI2Q9H6S1 392 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 BCAS3Q9H6U6 928 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 OLFML3Q9NRN5 406 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 LARSQ9P2J5 1176 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 UBE4BO95155 1302 aa12.85□□□□□ -0.35
SNRNP35-202ENST00000412157 ZSWIM8A7E2V4 1837 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 GSTTP1A0A1W2PQM5 241 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 KCNJ18B7U540 433 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 TNRC18O15417 2968 aaPredicted RBP12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 ZNF862O60290 1169 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 GH1P01241 217 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 OATP04181 439 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 TPM2P07951 284 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 ZNF131P52739 623 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 PMS1P54277 932 aaKnown RBP12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 KCNJ12Q14500 433 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 MORN1Q5T089 497 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 ANKRD40Q6AI12 368 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 CCDC62Q6P9F0 684 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 FOXR2Q6PJQ5 311 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 PPP4R3CPQ6ZMV5 832 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 FAM178BQ8IXR5 827 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 NPLOC4Q8TAT6 608 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 FAM167AQ96KS9 214 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 SRRTQ9BXP5 876 aaKnown RBP12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 ABHD16BQ9H3Z7 469 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 PCDHA2Q9Y5H9 948 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 MAFBQ9Y5Q3 323 aaPredicted RBP12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 KAT6AQ92794 2004 aa12.84□□□□□ -0.35
SNRNP35-202ENST00000412157 IGKV6D-21A0A0A0MT36 114 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 RBM47A0AV96 593 aaKnown RBP12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 TNPO2O14787 897 aaKnown RBP12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 DGAT1O75907 488 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 EEF1GP26641 437 aaKnown RBP12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 TCF7P36402 384 aaPredicted RBP12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 RGS2P41220 211 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 STAT5BP51692 787 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 NPEPPSP55786 919 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 ALCAMQ13740 583 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 LAMC2Q13753 1193 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 MTERF2Q49AM1 385 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 HS1BP3Q53T59 392 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 ODR4Q5SWX8 454 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 ANO5Q75V66 913 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 CREBRFQ8IUR6 639 aa12.83□□□□□ -0.36
SNRNP35-202ENST00000412157 NELFCDQ8IXH7 590 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms